Detailed information    

insolico Bioinformatically predicted

Overview

Name   brsR   Type   Regulator
Locus tag   SITYG_RS09750 Genome accession   NZ_AP014880
Coordinates   1905574..1906014 (+) Length   146 a.a.
NCBI ID   WP_041823295.1    Uniprot ID   -
Organism   Streptococcus intermedius strain TYG1620     
Function   antagonizing the proteolysis of ComX (predicted from homology)   
Competence regulation

Genomic Context

Location: 1900574..1911014
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SITYG_RS09720 (SITYG_19140) - 1900739..1900912 (-) 174 Protein_1875 CPBP family intramembrane glutamate endopeptidase -
  SITYG_RS09725 (SITYG_19150) - 1900917..1901471 (-) 555 WP_096363249.1 DNA-3-methyladenine glycosylase I -
  SITYG_RS09730 (SITYG_19160) ruvA 1901481..1902071 (-) 591 WP_096363250.1 Holliday junction branch migration protein RuvA Machinery gene
  SITYG_RS09735 (SITYG_19170) - 1902241..1902747 (+) 507 WP_096363251.1 helix-turn-helix domain-containing protein -
  SITYG_RS09740 (SITYG_19180) - 1902731..1903240 (+) 510 WP_162287173.1 RDD family protein -
  SITYG_RS09745 (SITYG_19190) hexB 1903386..1905332 (-) 1947 WP_021003321.1 DNA mismatch repair endonuclease MutL Machinery gene
  SITYG_RS09750 (SITYG_19200) brsR 1905574..1906014 (+) 441 WP_041823295.1 LytTR family DNA-binding domain-containing protein Regulator
  SITYG_RS09755 (SITYG_19210) - 1906011..1906469 (+) 459 WP_020999243.1 DUF3021 domain-containing protein -
  SITYG_RS09760 (SITYG_19220) hexA 1906610..1909168 (-) 2559 WP_096363253.1 DNA mismatch repair protein MutS Machinery gene
  SITYG_RS09765 (SITYG_19230) argR 1909331..1909771 (-) 441 WP_003075336.1 arginine repressor -

Sequence

Protein


Download         Length: 146 a.a.        Molecular weight: 16941.69 Da        Isoelectric Point: 7.3971

>NTDB_id=56580 SITYG_RS09750 WP_041823295.1 1905574..1906014(+) (brsR) [Streptococcus intermedius strain TYG1620]
MKVQMHIDEKFSEEKIIIEAPVLSDSVQQLLTFAQHIGKNKTIRAKKEEEIYLLNSTEIQRVYTENRQVWAETATDTYLL
GLPLYQVLELLPTDFLQISQSEIINIKHIDHLKLTGSGLIQIAMKNGQITYSSRRYLKVIKEKLQL

Nucleotide


Download         Length: 441 bp        

>NTDB_id=56580 SITYG_RS09750 WP_041823295.1 1905574..1906014(+) (brsR) [Streptococcus intermedius strain TYG1620]
ATGAAAGTTCAAATGCATATTGACGAAAAATTTTCAGAAGAAAAGATCATTATTGAAGCGCCTGTTTTGTCGGATTCCGT
TCAACAACTACTAACATTTGCTCAACATATCGGTAAAAATAAAACCATTCGAGCAAAAAAAGAGGAGGAAATTTACCTAC
TAAATAGCACGGAGATACAACGCGTCTATACTGAAAATCGGCAAGTTTGGGCCGAAACAGCAACAGATACTTATCTCTTA
GGGCTTCCACTTTATCAAGTTTTGGAATTGCTTCCCACTGATTTTCTACAGATTTCCCAATCTGAAATCATTAACATCAA
ACATATCGATCATCTGAAATTGACTGGTAGTGGTCTGATTCAGATTGCAATGAAAAACGGTCAGATAACTTATTCATCTC
GCCGTTATCTCAAAGTCATAAAGGAGAAATTACAGCTATGA

Domains

Predicted by InterProScan.

LytTr DNA-binding domain (LytTR)

(50-144)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  brsR Streptococcus mutans UA159

36.986

100

0.37

Multiple sequence alignment