Detailed information
Bioinformatically predicted
Overview
| Name | pptB | Type | Regulator |
| Locus tag | SITYG_RS02050 | Genome accession | NZ_AP014880 |
| Coordinates | 390827..391873 (+) | Length | 348 a.a. |
| NCBI ID | WP_003073839.1 | Uniprot ID | - |
| Organism | Streptococcus intermedius strain TYG1620 | ||
| Function | export ComS (predicted from homology) Competence regulation |
||
Genomic Context
Location: 385827..396873
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| SITYG_RS02020 (SITYG_03770) | tsaE | 387214..387654 (+) | 441 | WP_009568047.1 | tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE | - |
| SITYG_RS02025 (SITYG_03780) | - | 387647..388168 (+) | 522 | WP_096362548.1 | GNAT family N-acetyltransferase | - |
| SITYG_RS02030 (SITYG_03790) | brpA | 388176..389279 (+) | 1104 | WP_003073846.1 | biofilm formation/cell division transcriptional regulator BrpA | - |
| SITYG_RS02035 (SITYG_03800) | - | 389323..389610 (-) | 288 | WP_096362549.1 | hypothetical protein | - |
| SITYG_RS02040 (SITYG_03810) | - | 389620..390030 (-) | 411 | WP_096362550.1 | HIT family protein | - |
| SITYG_RS02045 (SITYG_03820) | pptA | 390099..390830 (+) | 732 | WP_003073841.1 | ABC transporter ATP-binding protein | Regulator |
| SITYG_RS02050 (SITYG_03830) | pptB | 390827..391873 (+) | 1047 | WP_003073839.1 | ABC transporter permease | Regulator |
| SITYG_RS02055 (SITYG_03840) | ccrZ | 391924..392721 (+) | 798 | WP_003073837.1 | cell cycle regulator CcrZ | - |
| SITYG_RS02060 (SITYG_03850) | trmB | 392718..393353 (+) | 636 | WP_003078354.1 | tRNA (guanosine(46)-N7)-methyltransferase TrmB | - |
| SITYG_RS02065 (SITYG_03860) | - | 393760..394452 (+) | 693 | WP_096362551.1 | VIT family protein | - |
| SITYG_RS02070 (SITYG_03870) | rimP | 394664..395152 (+) | 489 | WP_006269953.1 | ribosome maturation factor RimP | - |
| SITYG_RS02075 (SITYG_03880) | nusA | 395204..396397 (+) | 1194 | WP_003078357.1 | transcription termination factor NusA | - |
| SITYG_RS02080 (SITYG_03890) | rnpM | 396408..396704 (+) | 297 | WP_003078278.1 | RNase P modulator RnpM | - |
Sequence
Protein
Download Length: 348 a.a. Molecular weight: 40785.17 Da Isoelectric Point: 10.3580
>NTDB_id=56492 SITYG_RS02050 WP_003073839.1 390827..391873(+) (pptB) [Streptococcus intermedius strain TYG1620]
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSQRFYQGAG
INWGYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYSVLLVETIMALLFFQD
RVALLFMVGVTLLLYFFYLPVKLKSLVD
MKEVFQKRKQVFRNQCLKYSRYVFNDHFVLFLLVFIGFLAVQYSQLLRNFPKNHLPIILALAVLLVFLLPLGRIATYMEK
PDSLFLLVKEEELKSYLQKQMCSSYLLWSVFQTAILLLAAPLLLALGLPFWGWFILVFFMLIAKWFLFLKKSQRFYQGAG
INWGYLIDYEERRKQTILRFFALFTNVKGISNSVKRRAYLDGLTNILPKRQSTTWQNMFLRSYLRNGDFLALTMRLLFLS
LLGIGLLGQSWIAAVFVILLNYLLLFQLTALYNAFDYQYLTFLFPLEIGLKLKGVRQVIVLVGYSVLLVETIMALLFFQD
RVALLFMVGVTLLLYFFYLPVKLKSLVD
Nucleotide
Download Length: 1047 bp
>NTDB_id=56492 SITYG_RS02050 WP_003073839.1 390827..391873(+) (pptB) [Streptococcus intermedius strain TYG1620]
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGATCA
TTTTGTTCTATTTTTATTAGTTTTTATTGGCTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATCTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCAAAGATTTTATCAAGGAGCAGGC
ATAAATTGGGGCTATCTCATTGACTACGAAGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTATTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATGGTTTGACAAATATTTTGCCAAAAAGGCAATCAACCA
CTTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACTGCTTTGTACAACGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAGTGTGCTGTTAGTTGAAACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCACTGCTTTTCATGGTAGGAGTTACACTATTGCTTTATTTTTTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA
ATGAAAGAAGTGTTTCAAAAGCGCAAGCAAGTATTTCGCAATCAATGTTTGAAATATTCACGCTATGTTTTTAACGATCA
TTTTGTTCTATTTTTATTAGTTTTTATTGGCTTTTTAGCTGTTCAATATAGTCAACTGTTGCGAAATTTTCCTAAAAATC
ACCTGCCAATTATTCTTGCTTTAGCAGTTCTTTTGGTGTTCTTGTTGCCTTTGGGAAGAATTGCAACGTATATGGAAAAG
CCAGATAGTCTATTTTTGTTGGTCAAAGAAGAAGAATTAAAAAGTTATTTACAAAAACAAATGTGTTCATCTTATCTATT
ATGGAGTGTATTTCAAACGGCTATTCTATTACTAGCAGCGCCACTCCTTTTGGCGCTAGGATTACCATTTTGGGGATGGT
TTATTCTTGTATTTTTTATGTTAATAGCAAAATGGTTTCTATTTTTGAAAAAGAGCCAAAGATTTTATCAAGGAGCAGGC
ATAAATTGGGGCTATCTCATTGACTACGAAGAGAGACGAAAGCAGACAATCTTGCGTTTCTTTGCTCTATTTACCAATGT
AAAAGGAATCTCCAATAGCGTGAAACGCCGAGCCTATCTTGATGGTTTGACAAATATTTTGCCAAAAAGGCAATCAACCA
CTTGGCAGAATATGTTTTTACGCTCTTATTTGCGAAATGGTGATTTTCTGGCTTTGACCATGCGGTTGCTATTTCTATCT
CTTTTAGGAATTGGCTTGCTCGGTCAATCTTGGATTGCGGCTGTTTTTGTGATACTGTTGAATTATCTTTTGCTATTTCA
ATTGACTGCTTTGTACAACGCTTTTGATTATCAATATTTGACATTCTTATTTCCTCTAGAAATCGGATTAAAGTTAAAGG
GTGTGAGACAAGTGATTGTTCTTGTTGGTTACAGTGTGCTGTTAGTTGAAACAATTATGGCGTTGCTATTTTTCCAAGAT
AGAGTTGCACTGCTTTTCATGGTAGGAGTTACACTATTGCTTTATTTTTTCTATTTACCAGTTAAATTAAAAAGTTTGGT
TGACTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pptB | Streptococcus thermophilus LMD-9 |
47.701 |
100 |
0.477 |
| pptB | Streptococcus salivarius strain HSISS4 |
46.839 |
100 |
0.468 |