Detailed information
Bioinformatically predicted
Overview
| Name | pilO | Type | Machinery gene |
| Locus tag | PA8380_RS27835 | Genome accession | NZ_AP014839 |
| Coordinates | 6014301..6014924 (-) | Length | 207 a.a. |
| NCBI ID | WP_003116135.1 | Uniprot ID | A0A0H2ZIF6 |
| Organism | Pseudomonas aeruginosa strain 8380 | ||
| Function | assembly of type IV pilus (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 6009301..6019924
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| PA8380_RS27815 (PA8380_57120) | aroB | 6009908..6011014 (-) | 1107 | WP_016253983.1 | 3-dehydroquinate synthase | - |
| PA8380_RS27820 (PA8380_57130) | aroK | 6011064..6011582 (-) | 519 | WP_003095833.1 | shikimate kinase AroK | - |
| PA8380_RS27825 (PA8380_57140) | pilQ | 6011594..6013726 (-) | 2133 | WP_003116137.1 | type 4a pilus secretin PilQ | Machinery gene |
| PA8380_RS27830 (PA8380_57150) | comL/pilP | 6013780..6014304 (-) | 525 | WP_003116136.1 | type 4a pilus biogenesis lipoprotein PilP | Machinery gene |
| PA8380_RS27835 (PA8380_57160) | pilO | 6014301..6014924 (-) | 624 | WP_003116135.1 | type 4a pilus biogenesis protein PilO | Machinery gene |
| PA8380_RS27840 (PA8380_57170) | pilN | 6014921..6015517 (-) | 597 | WP_003141783.1 | type 4a pilus biogenesis protein PilN | - |
| PA8380_RS27845 (PA8380_57180) | pilM | 6015517..6016581 (-) | 1065 | WP_003110888.1 | type IV pilus assembly protein PilM | Machinery gene |
| PA8380_RS27850 (PA8380_57190) | - | 6016766..6019237 (+) | 2472 | WP_017148635.1 | penicillin-binding protein 1A | - |
Sequence
Protein
Download Length: 207 a.a. Molecular weight: 22958.35 Da Isoelectric Point: 4.9107
>NTDB_id=56456 PA8380_RS27835 WP_003116135.1 6014301..6014924(-) (pilO) [Pseudomonas aeruginosa strain 8380]
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMSILAKTYRYNDKGLKK
MSLASSLESLRKIDVNDLDLNNIGSWPAAVKVIVCVLLTAAVLALGYNFHLRDLQTQLEQQAAQEESLKQQFATKAFQAA
NLEAYKAQMKEMEESFGALLRQLPSDTEVPGLLEDITRTGLGSGLEFEEIKLLPEVTQQFYIELPIQISVVGGYHDLATF
VSGVSSLPRIVTLHDFEIKPASPDNTSKLRMSILAKTYRYNDKGLKK
Nucleotide
Download Length: 624 bp
>NTDB_id=56456 PA8380_RS27835 WP_003116135.1 6014301..6014924(-) (pilO) [Pseudomonas aeruginosa strain 8380]
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGCATCCTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
ATGAGTCTGGCCAGTTCCCTGGAAAGTCTGCGCAAGATCGACGTAAACGACCTCGATCTGAACAACATCGGTTCCTGGCC
GGCGGCGGTCAAGGTCATCGTCTGCGTGCTGCTGACCGCGGCGGTCCTGGCGCTGGGCTACAACTTCCATCTCCGTGACT
TGCAAACACAGCTCGAACAGCAGGCTGCGCAAGAAGAATCGCTCAAGCAGCAATTTGCTACCAAAGCGTTCCAGGCCGCG
AACCTGGAAGCCTACAAGGCACAGATGAAAGAGATGGAGGAGTCCTTCGGCGCCTTGCTGCGGCAGTTGCCCAGCGACAC
CGAGGTACCCGGGCTGCTCGAGGACATCACTCGTACCGGTCTGGGCAGCGGCCTGGAGTTCGAGGAGATCAAGCTGCTCC
CTGAAGTCACTCAGCAGTTCTATATCGAGCTGCCGATCCAGATCAGCGTGGTCGGCGGCTACCACGACCTGGCGACCTTC
GTCAGCGGCGTGTCCAGCCTGCCGCGGATCGTTACCCTGCATGACTTCGAGATCAAGCCGGCTTCGCCCGATAACACCTC
GAAGCTGCGCATGAGCATCCTGGCCAAGACCTACCGCTACAACGACAAGGGGCTGAAGAAATGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilO | Legionella pneumophila strain ERS1305867 |
45.596 |
93.237 |
0.425 |
| pilO | Acinetobacter baumannii D1279779 |
45.789 |
91.787 |
0.42 |
| comO/pilO | Acinetobacter baylyi ADP1 |
43.617 |
90.821 |
0.396 |