Detailed information
Bioinformatically predicted
Overview
| Name | Cj0011c | Type | Machinery gene |
| Locus tag | UWK_RS08865 | Genome accession | NC_020304 |
| Coordinates | 1995994..1996248 (-) | Length | 84 a.a. |
| NCBI ID | WP_015404032.1 | Uniprot ID | M1PPJ3 |
| Organism | Desulfocapsa sulfexigens DSM 10523 | ||
| Function | DNA binding (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1990994..2001248
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| UWK_RS08840 (UWK_01778) | - | 1992243..1993205 (-) | 963 | WP_015404027.1 | serine kinase of the HPr protein, regulates carbohydrate metabolism | - |
| UWK_RS08845 (UWK_01779) | - | 1993272..1993520 (-) | 249 | WP_052326982.1 | PqqD family protein | - |
| UWK_RS20150 (UWK_01780) | - | 1993680..1994129 (-) | 450 | WP_015404029.1 | lasso peptide biosynthesis B2 protein | - |
| UWK_RS08855 (UWK_01781) | - | 1994172..1994852 (-) | 681 | WP_015404030.1 | ABC transporter permease | - |
| UWK_RS08860 (UWK_01782) | - | 1994992..1995819 (-) | 828 | WP_015404031.1 | ABC transporter ATP-binding protein | - |
| UWK_RS08865 (UWK_01783) | Cj0011c | 1995994..1996248 (-) | 255 | WP_015404032.1 | helix-hairpin-helix domain-containing protein | Machinery gene |
| UWK_RS08870 (UWK_01784) | cysC | 1996492..1997094 (-) | 603 | WP_015404033.1 | adenylyl-sulfate kinase | - |
| UWK_RS20155 | - | 1997144..1997299 (-) | 156 | WP_407637480.1 | four helix bundle protein | - |
| UWK_RS08875 (UWK_01785) | galU | 1997346..1998212 (-) | 867 | WP_015404034.1 | UTP--glucose-1-phosphate uridylyltransferase GalU | - |
| UWK_RS08880 (UWK_01786) | - | 1998435..1999175 (+) | 741 | WP_015404035.1 | hypothetical protein | - |
| UWK_RS08885 (UWK_01787) | - | 1999168..1999773 (+) | 606 | WP_015404036.1 | methyl-accepting chemotaxis protein | - |
| UWK_RS08890 (UWK_01788) | - | 1999766..2000302 (+) | 537 | WP_015404037.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 84 a.a. Molecular weight: 9124.81 Da Isoelectric Point: 10.0551
>NTDB_id=56241 UWK_RS08865 WP_015404032.1 1995994..1996248(-) (Cj0011c) [Desulfocapsa sulfexigens DSM 10523]
MKKTILLLLTLLFLTVNIAIAAININTADEKTLATLPGIGEAKAAAIVQYRKDNGNFKSPQDIVQVKGIGQKVFEKLSKE
ITVE
MKKTILLLLTLLFLTVNIAIAAININTADEKTLATLPGIGEAKAAAIVQYRKDNGNFKSPQDIVQVKGIGQKVFEKLSKE
ITVE
Nucleotide
Download Length: 255 bp
>NTDB_id=56241 UWK_RS08865 WP_015404032.1 1995994..1996248(-) (Cj0011c) [Desulfocapsa sulfexigens DSM 10523]
ATGAAGAAAACGATACTACTCTTATTAACCCTCTTATTCCTAACCGTAAATATAGCAATTGCTGCCATTAACATTAACAC
CGCCGATGAGAAAACATTGGCCACACTTCCCGGGATTGGTGAAGCAAAAGCTGCCGCAATAGTGCAGTACCGTAAAGATA
ATGGAAATTTCAAATCTCCCCAAGATATCGTACAGGTAAAAGGGATAGGTCAAAAAGTTTTTGAGAAACTCTCTAAGGAA
ATCACCGTAGAGTAA
ATGAAGAAAACGATACTACTCTTATTAACCCTCTTATTCCTAACCGTAAATATAGCAATTGCTGCCATTAACATTAACAC
CGCCGATGAGAAAACATTGGCCACACTTCCCGGGATTGGTGAAGCAAAAGCTGCCGCAATAGTGCAGTACCGTAAAGATA
ATGGAAATTTCAAATCTCCCCAAGATATCGTACAGGTAAAAGGGATAGGTCAAAAAGTTTTTGAGAAACTCTCTAAGGAA
ATCACCGTAGAGTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| Cj0011c | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
53.247 |
91.667 |
0.488 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
96.429 |
0.452 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
96.429 |
0.452 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
96.429 |
0.452 |
| comE | Neisseria gonorrhoeae MS11 |
46.914 |
96.429 |
0.452 |
| comEA | Bacillus subtilis subsp. subtilis str. 168 |
49.206 |
75 |
0.369 |