Detailed information NTG0561449

Bioinformatically predicted

Overview

• Name: comR
• Type: Regulator
• Locus tag: L3474_RS09155
• Genome accession: NZ_CP091450
• Coordinates: 1801219..1802118 (-)
• Length: 299 a.a.
• NCBI ID: WP_000904848.1
• Uniprot ID: -
• Organism: Streptococcus pneumoniae strain 3641/15
• Function: activate transcription of comX (predicted from homology) Competence regulation

Genomic Context

Location: 1796219..1807118

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
L3474_RS09135 (L3474_09070)	rsmA	1796869..1797741 (-)	873	WP_001216856.1	16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA	-
L3474_RS09140 (L3474_09075)	-	1797992..1798285 (-)	294	Protein_1793	hypothetical protein	-
L3474_RS09145 (L3474_09080)	-	1798278..1798919 (-)	642	WP_000565531.1	ABC transporter ATP-binding protein	-
L3474_RS09150 (L3474_09085)	-	1798921..1800951 (-)	2031	WP_000825271.1	bacteriocin-associated integral membrane family protein	-
L3474_RS09155 (L3474_09090)	comR	1801219..1802118 (-)	900	WP_000904848.1	helix-turn-helix transcriptional regulator	Regulator
L3474_RS09160 (L3474_09095)	rnmV	1802190..1802750 (-)	561	WP_000660013.1	ribonuclease M5	-
L3474_RS09165 (L3474_09100)	-	1802750..1803523 (-)	774	WP_000575650.1	TatD family hydrolase	-
L3474_RS09170 (L3474_09105)	-	1803828..1804799 (-)	972	Protein_1799	DUF1542 domain-containing protein	-
L3474_RS09175 (L3474_09110)	rpmH	1805005..1805139 (-)	135	WP_000831905.1	50S ribosomal protein L34	-
L3474_RS09180 (L3474_09115)	-	1805284..1806498 (-)	1215	WP_000666484.1	pyridoxal phosphate-dependent aminotransferase	-
L3474_RS09185 (L3474_09120)	-	1806654..1806946 (-)	293	Protein_1802	hypothetical protein	-

Sequence

Protein

• Length: 299 a.a.
• Molecular weight: 35420.14 Da
• Isoelectric Point: 4.6674

>NTDB_id=561449 L3474_RS09155 WP_000904848.1 1801219..1802118(-) (comR) [Streptococcus pneumoniae strain 3641/15]
MLIGQKIKEIRIEKGISRPDFCGDEQELTVRQLSRIESGASQPSLPKLDYIARRLGVPVYSLMPDFSALPPAYLELKYQI
LREPIYGKEEEYDKKEACLEEIYKTYFDNLPKEEQLACEVLQACLDTSRTRRPEYAELILEEHMPQIIEKEVYSTNDMLL
IRLFFYQMLIRKDLAKFINQIEELMLFLLEQKKVTKLENFFIIRDTLISGMCCLEKVGVTDCFNDYLSCLQEIMDKTQDY
QKKPLVFMFLWKQALREERDFSLAESFYQSSKTFAQLIGDEFLVKKLTEEWQEDVKKYL

Nucleotide

• Length: 900 bp

>NTDB_id=561449 L3474_RS09155 WP_000904848.1 1801219..1802118(-) (comR) [Streptococcus pneumoniae strain 3641/15]
ATGTTAATTGGTCAAAAAATTAAAGAGATTCGGATAGAAAAAGGAATTAGTCGTCCAGATTTTTGTGGAGATGAGCAAGA
ACTGACAGTTCGTCAACTGTCGCGAATTGAAAGTGGAGCTTCGCAACCGAGTTTGCCCAAGTTAGACTATATTGCTCGCC
GGCTAGGAGTTCCAGTTTATAGCCTTATGCCGGATTTTTCAGCTCTTCCTCCTGCTTATTTAGAATTGAAATATCAGATT
TTACGTGAACCAATCTATGGTAAAGAAGAGGAGTACGATAAGAAGGAAGCGTGTTTGGAAGAGATTTATAAAACATACTT
TGATAATCTTCCTAAAGAAGAACAATTAGCATGTGAAGTATTGCAGGCGTGTTTGGATACTTCTAGAACTAGAAGGCCTG
AATATGCAGAGTTAATACTTGAGGAACATATGCCTCAGATCATAGAAAAAGAAGTTTATTCAACAAATGATATGTTGTTG
ATTCGTTTGTTTTTTTATCAAATGCTCATTAGAAAAGATCTTGCCAAATTTATAAATCAAATCGAAGAGCTAATGCTCTT
TCTTTTGGAACAGAAAAAGGTAACTAAATTAGAAAACTTCTTTATAATTAGAGATACTCTTATTTCAGGAATGTGTTGTC
TTGAAAAGGTAGGAGTAACTGATTGTTTTAATGATTATCTATCGTGTTTACAAGAAATTATGGATAAAACTCAAGATTAT
CAAAAGAAACCTCTTGTATTTATGTTTTTGTGGAAGCAAGCATTAAGAGAAGAAAGAGATTTTAGTTTAGCTGAATCATT
TTATCAGTCTTCTAAAACATTTGCGCAGCTAATTGGAGATGAATTTCTAGTAAAGAAATTGACAGAGGAATGGCAAGAGG
ATGTCAAAAAATATTTATAA

Domains

Predicted by InterProScan.

• ComR tetratricopeptide (ComR_TPR) (70-291)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comR	Streptococcus mutans UA159	37.755	98.328	0.371
comR	Streptococcus pyogenes MGAS8232	36.577	99.666	0.365
comR	Streptococcus pyogenes MGAS315	36	100	0.361
comR	Streptococcus suis P1/7	37.113	97.324	0.361
comR	Streptococcus suis 05ZYH33	37.113	97.324	0.361