Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   KFF03_RS16075 Genome accession   NZ_CP073745
Coordinates   3540835..3541218 (-) Length   127 a.a.
NCBI ID   WP_068660884.1    Uniprot ID   A0A9J7ADK6
Organism   Bacterioplanoides sp. SCSIO 12839     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 3535835..3546218
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KFF03_RS16055 (KFF03_15975) - 3536856..3537743 (-) 888 WP_255857935.1 protein-glutamate O-methyltransferase CheR -
  KFF03_RS16060 (KFF03_15980) - 3537757..3539811 (-) 2055 WP_255857936.1 methyl-accepting chemotaxis protein -
  KFF03_RS16065 (KFF03_15985) - 3539911..3540435 (-) 525 WP_255857937.1 chemotaxis protein CheW -
  KFF03_RS16070 (KFF03_15990) pilH 3540437..3540802 (-) 366 WP_255857938.1 twitching motility response regulator PilH -
  KFF03_RS16075 (KFF03_15995) pilG 3540835..3541218 (-) 384 WP_068660884.1 twitching motility response regulator PilG Regulator
  KFF03_RS16080 (KFF03_16000) gshB 3541444..3542388 (+) 945 WP_255857939.1 glutathione synthase -
  KFF03_RS16085 (KFF03_16005) - 3542510..3543388 (+) 879 WP_255857940.1 energy transducer TonB -
  KFF03_RS16090 (KFF03_16010) - 3543417..3543974 (+) 558 WP_255857941.1 YqgE/AlgH family protein -
  KFF03_RS16095 (KFF03_16015) ruvX 3543974..3544426 (+) 453 WP_255857942.1 Holliday junction resolvase RuvX -
  KFF03_RS16100 (KFF03_16020) pyrR 3544438..3544944 (+) 507 WP_255857943.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  KFF03_RS16105 (KFF03_16025) - 3544955..3545953 (+) 999 WP_255857944.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 127 a.a.        Molecular weight: 14195.47 Da        Isoelectric Point: 7.8169

>NTDB_id=560390 KFF03_RS16075 WP_068660884.1 3540835..3541218(-) (pilG) [Bacterioplanoides sp. SCSIO 12839]
MDDNFQNVKVMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADTHPDIIFVDIMMPRLDGYQTCALIKNNSKFK
STPVIMLSSKDGLFDKAKGRIVGSDEYLTKPFSKEELLGSIRQYVKS

Nucleotide


Download         Length: 384 bp        

>NTDB_id=560390 KFF03_RS16075 WP_068660884.1 3540835..3541218(-) (pilG) [Bacterioplanoides sp. SCSIO 12839]
ATGGACGATAACTTTCAGAATGTAAAAGTCATGGTCATCGACGACAGTAAAACCATTCGTCGTACGGCTGAGACGCTGCT
TAAAAAAGTTGGCTGCGAAGTGATCACTGCAACAGATGGTTTTGATGCACTCGCAAAAATTGCTGACACACATCCGGATA
TCATTTTTGTTGATATCATGATGCCCCGCCTGGACGGATACCAGACCTGTGCCTTGATTAAAAATAATTCCAAATTCAAG
TCCACTCCGGTCATTATGTTGTCCAGTAAAGATGGCTTATTTGATAAAGCCAAAGGCCGCATTGTTGGTTCAGATGAGTA
TCTGACCAAACCATTCAGCAAAGAAGAGCTGCTTGGTTCAATTCGCCAGTACGTGAAATCCTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

77.953

100

0.78
  pilH Synechocystis sp. PCC 6803

41.525

92.913

0.386
  vicR Streptococcus mutans UA159

41.525

92.913

0.386
  micA Streptococcus pneumoniae Cp1015

38.983

92.913

0.362