Detailed information NTG0559620

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: KEF49_RS16980
• Genome accession: NZ_CP073635
• Coordinates: 3345155..3346318 (-)
• Length: 387 a.a.
• NCBI ID: WP_065982454.1
• Uniprot ID: -
• Organism: Bacillus amyloliquefaciens strain Ba13
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3340155..3351318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
KEF49_RS16950 (KEF49_16950)	-	3340421..3340840 (-)	420	WP_212099487.1	TIGR03826 family flagellar region protein	-
KEF49_RS16955 (KEF49_16955)	comFC	3340914..3341609 (-)	696	WP_231131128.1	double zinc ribbon domain-containing protein	Machinery gene
KEF49_RS16960 (KEF49_16960)	-	3341609..3341893 (-)	285	WP_013353784.1	competence protein ComFB	-
KEF49_RS16965 (KEF49_16965)	comFA	3341952..3343337 (-)	1386	WP_212099490.1	DEAD/DEAH box helicase	Machinery gene
KEF49_RS16970 (KEF49_16970)	-	3343444..3344292 (-)	849	WP_212099493.1	DegV family protein	-
KEF49_RS16975 (KEF49_16975)	degU	3344389..3345078 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
KEF49_RS16980 (KEF49_16980)	degS	3345155..3346318 (-)	1164	WP_065982454.1	two-component sensor histidine kinase DegS	Regulator
KEF49_RS16985 (KEF49_16985)	-	3346541..3347188 (+)	648	WP_212099496.1	YigZ family protein	-
KEF49_RS16990 (KEF49_16990)	-	3347193..3348374 (+)	1182	WP_065982456.1	LCP family protein	-
KEF49_RS16995 (KEF49_16995)	-	3348475..3349551 (-)	1077	WP_060964142.1	MraY family glycosyltransferase	-
KEF49_RS17000 (KEF49_17000)	-	3349684..3350880 (-)	1197	WP_212099500.1	glycosyltransferase	-

Sequence

Protein

• Length: 387 a.a.
• Molecular weight: 45028.81 Da
• Isoelectric Point: 6.8617

>NTDB_id=559620 KEF49_RS16980 WP_065982454.1 3345155..3346318(-) (degS) [Bacillus amyloliquefaciens strain Ba13]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVHTRHARNRLSEVSR
NFHKFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLRQVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEDGFQEIRNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGDTENKRLAPQFEVALFRLAQEAVTNALKHSESEEITVKVEV
TADFVVLIIKDNGKGFDINEAKQKKNKSFGLLGMKERVDLLEGTITIDSKIGLGTFIMIKVPLSLGL

Nucleotide

• Length: 1164 bp

>NTDB_id=559620 KEF49_RS16980 WP_065982454.1 3345155..3346318(-) (degS) [Bacillus amyloliquefaciens strain Ba13]
ATGAATAAAACGAAGATGGACTCCAAAGTTTTGGATTCTATACTTATGAAAATGCTGAAAACCGTGGACGGGAGTAAGGA
CGAGGTTTTTCAAATCGGAGAGCAGTCGCGCCAGCAATATGAGCAGCTGGTCGAAGAACTCAAACAGATCAAACAGCAGG
TGTACGAAGTCATTGAGCTGGGCGACAAACTCGAAGTACATACCCGGCACGCAAGAAACCGCTTGTCGGAAGTAAGCAGA
AATTTCCATAAGTTCAGCGAAGAAGAAATTCGCAACGCCTATGAAAAGGCGCACAAACTTCAAGTGGAACTGACGATGAT
CCAGCAGCGTGAAAAGCAGCTGCGGGAGCGCAGAGATGATTTAGAACGCCGGCTTTTGGGGCTCCAGGAAATCATTGAAC
GGTCAGAATCATTGGTCAGCCAAATAACCGTCGTTCTGAATTACCTGAATCAAGACCTTCGCCAAGTGGGGCTTCTGCTT
GCCGATGCGCAGGCTAAACAAGATTTCGGTTTAAGAATTATCGAAGCCCAAGAGGAAGAAAGAAAAAGAGTTTCCAGAGA
AATTCATGACGGCCCGGCTCAAATGCTGGCAAATGTCATGATGAGATCGGAATTGATAGAACGGATCTTCCGCGACCGCG
GCACGGAGGACGGCTTTCAGGAAATCAGAAATCTTCGCCAGAATGTGCGGAATGCTCTTTACGAAGTCAGAAGGATTATA
TATGATTTAAGACCGATGGCATTGGACGATCTCGGGCTGATTCCGACACTGAGAAAATATCTTTATACAACTGAAGAATA
CAACGGAAAGGTGAAAATACATTTTCAGTGCATCGGAGACACGGAGAACAAAAGGCTTGCCCCGCAATTTGAAGTGGCGC
TTTTCCGTCTCGCTCAGGAAGCCGTCACAAATGCACTGAAGCATTCAGAATCAGAGGAAATTACAGTAAAAGTGGAAGTA
ACTGCTGATTTTGTCGTTCTTATCATTAAGGACAACGGAAAAGGCTTTGATATCAATGAGGCTAAACAAAAGAAAAACAA
GTCATTCGGCTTGCTGGGAATGAAAGAAAGAGTAGATCTGCTTGAAGGAACGATAACGATAGACTCTAAAATAGGTCTTG
GGACATTTATCATGATTAAGGTTCCGTTATCTCTCGGCCTATAA

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	95.584	99.483	0.951