Detailed information    

insolico Bioinformatically predicted

Overview

Name   comZ   Type   Regulator
Locus tag   HD73_RS07305 Genome accession   NC_020238
Coordinates   1353388..1353564 (+) Length   58 a.a.
NCBI ID   WP_001986215.1    Uniprot ID   A0A9W5QJV7
Organism   Bacillus thuringiensis serovar kurstaki str. HD73     
Function   repression of comG operon (predicted from homology)   
Competence regulation

Genomic Context

Location: 1348388..1358564
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  HD73_RS07285 (HD73_1399) clpC 1348719..1351319 (+) 2601 WP_000365401.1 ATP-dependent chaperone ClpB Regulator
  HD73_RS07290 (HD73_1400) - 1351358..1351540 (-) 183 WP_001211116.1 YjzD family protein -
  HD73_RS07295 (HD73_1401) - 1351697..1352431 (+) 735 WP_000028691.1 hydrolase -
  HD73_RS07300 (HD73_1402) - 1352461..1353333 (+) 873 WP_000487722.1 NAD(P)-dependent oxidoreductase -
  HD73_RS07305 (HD73_1403) comZ 1353388..1353564 (+) 177 WP_001986215.1 ComZ family protein Regulator
  HD73_RS07310 (HD73_1404) fabH 1354102..1355034 (+) 933 WP_001100533.1 beta-ketoacyl-ACP synthase III -
  HD73_RS07315 (HD73_1405) fabF 1355066..1356304 (+) 1239 WP_000412656.1 beta-ketoacyl-ACP synthase II -
  HD73_RS07320 (HD73_1406) - 1356411..1357199 (+) 789 WP_000513275.1 DUF2268 domain-containing putative Zn-dependent protease -
  HD73_RS07325 (HD73_1407) - 1357343..1358080 (+) 738 Protein_1360 YjbA family protein -

Sequence

Protein


Download         Length: 58 a.a.        Molecular weight: 6576.74 Da        Isoelectric Point: 4.4797

>NTDB_id=55933 HD73_RS07305 WP_001986215.1 1353388..1353564(+) (comZ) [Bacillus thuringiensis serovar kurstaki str. HD73]
MNEKSMQFLQIAMKHLPEAKAILDDNGIALDMEKAQPVLELLMKVMNEAYELGKADKE

Nucleotide


Download         Length: 177 bp        

>NTDB_id=55933 HD73_RS07305 WP_001986215.1 1353388..1353564(+) (comZ) [Bacillus thuringiensis serovar kurstaki str. HD73]
ATGAACGAAAAAAGCATGCAGTTTTTACAAATCGCAATGAAGCATTTACCGGAAGCAAAGGCAATTTTAGATGATAATGG
AATTGCACTTGATATGGAGAAGGCACAGCCGGTGTTAGAGTTGTTAATGAAAGTTATGAACGAAGCTTACGAGCTTGGGA
AAGCAGATAAAGAATAA

Domains

Predicted by InterproScan.

ComZ (ComZ)

(3-57)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comZ Bacillus subtilis subsp. subtilis str. 168

61.818

94.828

0.586

Multiple sequence alignment