Detailed information    

insolico Bioinformatically predicted

Overview

Name   comM   Type   Machinery gene
Locus tag   KCG51_RS00045 Genome accession   NZ_CP073119
Coordinates   5076..5552 (+) Length   158 a.a.
NCBI ID   WP_254342569.1    Uniprot ID   -
Organism   Neisseria subflava strain HP0069     
Function   ssDNA binding (predicted from homology)   
DNA processing

Genomic Context

Location: 76..10552
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  KCG51_RS00010 (KCG51_00010) - 116..929 (-) 814 Protein_1 exodeoxyribonuclease V subunit gamma -
  KCG51_RS00015 (KCG51_00015) - 1298..2166 (-) 869 Protein_2 lysophospholipid acyltransferase family protein -
  KCG51_RS00020 - 3582..3815 (+) 234 WP_254342563.1 S-adenosylmethionine synthetase N-terminal domain-containing protein -
  KCG51_RS00025 - 3812..4096 (+) 285 WP_254342565.1 hypothetical protein -
  KCG51_RS00030 - 4142..4468 (+) 327 WP_254342566.1 methionine adenosyltransferase domain-containing protein -
  KCG51_RS00035 - 4474..4656 (+) 183 WP_254342568.1 hypothetical protein -
  KCG51_RS00040 (KCG51_00025) - 4751..5072 (+) 322 Protein_7 accessory factor UbiK family protein -
  KCG51_RS00045 comM 5076..5552 (+) 477 WP_254342569.1 magnesium chelatase domain-containing protein Machinery gene
  KCG51_RS00050 - 5879..6031 (-) 153 WP_254342570.1 hypothetical protein -
  KCG51_RS00055 - 6032..6408 (+) 377 Protein_10 ATP-binding protein -
  KCG51_RS00060 - 6344..6508 (+) 165 WP_254342571.1 hypothetical protein -
  KCG51_RS00065 (KCG51_00035) - 6690..6811 (+) 122 Protein_12 cell division protein FtsN -
  KCG51_RS00070 (KCG51_00040) - 6960..7421 (-) 462 WP_254342572.1 hypothetical protein -
  KCG51_RS10790 - 7844..8437 (+) 594 Protein_14 thiol:disulfide interchange protein DsbA/DsbL -
  KCG51_RS00075 (KCG51_00045) - 8482..9299 (+) 818 Protein_15 undecaprenyl-diphosphate phosphatase -
  KCG51_RS00080 (KCG51_00050) - 9369..9818 (-) 450 Protein_16 type IV pilin protein -
  KCG51_RS00090 (KCG51_00055) - 10034..10317 (-) 284 Protein_17 helix-hairpin-helix domain-containing protein -

Sequence

Protein


Download         Length: 158 a.a.        Molecular weight: 17037.81 Da        Isoelectric Point: 10.6766

>NTDB_id=558141 KCG51_RS00045 WP_254342569.1 5076..5552(+) (comM) [Neisseria subflava strain HP0069]
MSLALVYSRALSGMNAPLVEVEAHLANGLPHFNIVGLPDTEVKESRDRVRAAIIQSGFDFPAKKITVNLAPADLPKESGR
FDLPIALGILAASDKSTLKKLSQYEFAGELALSGLRSRAWRTGHGMAGNAGRPFVRLAARKCRTGCRHAGITVYVRIL

Nucleotide


Download         Length: 477 bp        

>NTDB_id=558141 KCG51_RS00045 WP_254342569.1 5076..5552(+) (comM) [Neisseria subflava strain HP0069]
ATGTCGCTTGCTTTGGTTTACAGCCGCGCCTTAAGCGGCATGAATGCGCCGTTGGTCGAAGTGGAAGCCCACCTTGCCAA
CGGTTTGCCACATTTCAATATCGTCGGTTTGCCCGATACTGAAGTCAAAGAAAGCCGCGACCGTGTGCGTGCCGCCATTA
TCCAAAGCGGCTTCGACTTTCCCGCAAAGAAAATTACCGTCAACCTCGCACCGGCCGACCTCCCAAAAGAATCCGGCCGT
TTCGATTTGCCGATTGCCTTAGGCATTCTTGCCGCATCGGACAAATCAACCCTGAAAAAGCTCTCGCAATATGAATTTGC
CGGAGAATTGGCACTGTCCGGCCTGCGCTCCCGTGCGTGGCGCACTGGCCATGGCATGGCAGGGAATGCAGGCAGGCCGT
TCGTTCGTCTTGCCGCAAGAAAATGCCGAACAGGCTGCCGTCATGCCGGTATCACAGTTTATGTGCGCATTCTTTAG

Domains

Predicted by InterproScan.

Subunit ChlI of Mg-chelatase (ChlI)

(21-114)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comM Vibrio cholerae strain A1552

71.053

72.152

0.513
  comM Vibrio campbellii strain DS40M4

68.421

72.152

0.494
  comM Haemophilus influenzae Rd KW20

64.912

72.152

0.468
  comM Legionella pneumophila str. Paris

62.281

72.152

0.449
  comM Legionella pneumophila strain ERS1305867

62.281

72.152

0.449
  comM Glaesserella parasuis strain SC1401

58.772

72.152

0.424