Detailed information    

insolico Bioinformatically predicted

Overview


Name   htrA   Type   Regulator
Locus tag   L1O91_RS08230 Genome accession   NZ_CP091066
Coordinates   1727915..1729189 (+) Length   424 a.a.
NCBI ID   WP_054190131.1    Uniprot ID   -
Organism   Staphylococcus aureus strain UMCG579     
Function   require for competence development (predicted from homology)   
Competence regulation

Genomic Context


Location: 1722915..1734189
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  L1O91_RS08210 (L1O91_08210) - 1724240..1724335 (+) 96 WP_054190127.1 hypothetical protein -
  L1O91_RS08215 (L1O91_08215) - 1724296..1725426 (-) 1131 WP_054190128.1 HAD family hydrolase -
  L1O91_RS08220 (L1O91_08220) nagE 1725533..1726999 (-) 1467 WP_054190129.1 N-acetylglucosamine-specific PTS transporter subunit IIBC -
  L1O91_RS08225 (L1O91_08225) - 1727126..1727743 (-) 618 WP_070016692.1 1-acyl-sn-glycerol-3-phosphate acyltransferase -
  L1O91_RS08230 (L1O91_08230) htrA 1727915..1729189 (+) 1275 WP_054190131.1 S1C family serine protease Regulator
  L1O91_RS08235 (L1O91_08235) tyrS 1729283..1730545 (-) 1263 WP_054190132.1 tyrosine--tRNA ligase -
  L1O91_RS08240 (L1O91_08240) - 1730926..1731831 (+) 906 WP_054190133.1 transglycosylase domain-containing protein -
  L1O91_RS08245 (L1O91_08245) - 1731811..1731903 (-) 93 WP_031761401.1 hypothetical protein -

Sequence


Protein


Download         Length: 424 a.a.        Molecular weight: 45747.90 Da        Isoelectric Point: 9.8964

>NTDB_id=558067 L1O91_RS08230 WP_054190131.1 1727915..1729189(+) (htrA) [Staphylococcus aureus strain UMCG579]
MSDFNHTDHSTTNHSQTPRYRRPKFPWFKTVIVALIAGIIGALLVLGIGKVLNSTILNKDGSTVQTTNNKGGNQLDGQSK
KFGTVHEMIKSVSPTIVGVINMQKASSVDDLLKGKSSKPSEAGVGSGVIYQINNNSAYIVTNNHVIDGANEIRVQLHNKK
QVKAKLVGKDAVTDIAVLKIENTKGIKAIQFANSSKVQTGDSVFAMGNPLGLQFANSVTSGIISASERTIDAETTGGNTK
VSVLQTDAAINPGNSGGALVDINGNLVGINSMKIAATQVEGIGFAIPSNEVKVTIEQLVKHGKIDRPSIGIGLINLKDIP
EEEREQLHTDSEDGIYIAKADSDIDLKKGDIITEIDGKKIKDDVDLRSYLYENKKPGESVTVTVIRDGKTKEVKVKLKQQ
KEQPKRQSRSERQSPGQGDRDFFR

Nucleotide


Download         Length: 1275 bp        

>NTDB_id=558067 L1O91_RS08230 WP_054190131.1 1727915..1729189(+) (htrA) [Staphylococcus aureus strain UMCG579]
ATGTCAGATTTTAATCATACAGATCATTCTACAACAAACCATAGCCAAACACCTAGATACAGAAGACCTAAATTTCCATG
GTTTAAAACAGTCATCGTTGCATTGATTGCTGGAATCATTGGTGCACTTCTAGTACTTGGTATAGGCAAAGTATTAAATA
GTACAATTTTAAATAAAGATGGTTCAACTGTTCAAACAACAAATAATAAAGGCGGCAATCAATTAGACGGGCAAAGCAAG
AAATTCGGTACCGTTCATGAAATGATAAAATCTGTCTCCCCTACAATTGTTGGAGTAATTAACATGCAAAAAGCATCAAG
TGTAGACGACTTATTAAAAGGCAAATCATCTAAACCATCTGAAGCCGGTGTAGGTTCAGGTGTCATCTATCAAATAAACA
ATAATTCAGCTTATATCGTTACAAACAATCATGTTATTGATGGCGCAAATGAAATTAGAGTCCAATTACATAATAAAAAA
CAAGTTAAAGCGAAATTAGTTGGTAAAGATGCAGTAACTGATATTGCTGTACTTAAAATTGAAAATACAAAAGGTATTAA
AGCGATTCAATTCGCCAACTCTTCAAAAGTACAAACTGGCGATAGCGTATTCGCAATGGGTAACCCATTAGGATTACAAT
TTGCTAACTCTGTAACATCTGGTATCATTTCAGCAAGTGAACGTACTATTGATGCTGAGACAACTGGTGGTAATACAAAA
GTCAGCGTTCTTCAAACAGATGCTGCTATTAACCCTGGTAACTCAGGCGGCGCATTAGTAGATATAAATGGTAATTTAGT
TGGTATTAACTCAATGAAAATTGCTGCGACACAAGTTGAAGGTATCGGGTTTGCCATTCCAAGTAATGAAGTTAAAGTAA
CAATTGAACAACTTGTAAAACATGGTAAAATTGACCGCCCTTCGATTGGTATTGGTTTAATTAATTTGAAAGATATTCCT
GAAGAAGAGCGCGAGCAACTTCATACTGATAGCGAAGACGGTATTTATATCGCAAAAGCTGATAGTGATATTGATCTTAA
AAAAGGTGATATTATTACAGAAATTGATGGCAAGAAAATTAAAGATGATGTTGATTTAAGAAGCTATTTATATGAAAATA
AAAAACCTGGTGAATCAGTCACTGTTACCGTTATCCGTGATGGTAAAACAAAAGAAGTTAAAGTGAAATTAAAACAACAA
AAAGAACAACCAAAACGCCAAAGCCGATCAGAACGTCAATCACCTGGCCAAGGCGATAGAGATTTCTTTAGATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  htrA Streptococcus mutans UA159

38.557

94.811

0.366