Detailed information NTG0556400

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: J9319_RS17060
• Genome accession: NZ_CP072851
• Coordinates: 3256516..3257691 (-)
• Length: 391 a.a.
• NCBI ID: WP_035389673.1
• Uniprot ID: A0AB39J225
• Organism: Bacillus altitudinis strain 6ww6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3251516..3262691

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J9319_RS17030 (J9319_17030)	-	3251692..3252111 (-)	420	WP_210552221.1	TIGR03826 family flagellar region protein	-
J9319_RS17035 (J9319_17035)	comFC	3252168..3252854 (-)	687	WP_189337174.1	ComF family protein	Machinery gene
J9319_RS17040 (J9319_17040)	-	3252851..3253144 (-)	294	WP_035701582.1	competence protein ComFB	-
J9319_RS17045 (J9319_17045)	comFA	3253209..3254336 (-)	1128	WP_046344588.1	DEAD/DEAH box helicase	Machinery gene
J9319_RS17050 (J9319_17050)	-	3254708..3255550 (-)	843	WP_024719242.1	DegV family protein	-
J9319_RS17055 (J9319_17055)	degU	3255762..3256451 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
J9319_RS17060 (J9319_17060)	degS	3256516..3257691 (-)	1176	WP_035389673.1	sensor histidine kinase	Regulator
J9319_RS17065 (J9319_17065)	-	3257913..3258581 (+)	669	WP_017357860.1	YigZ family protein	-
J9319_RS17070 (J9319_17070)	-	3258566..3259657 (+)	1092	WP_025208065.1	LCP family protein	-
J9319_RS17075 (J9319_17075)	-	3259694..3260761 (-)	1068	WP_007499956.1	MraY family glycosyltransferase	-
J9319_RS17080 (J9319_17080)	-	3260896..3262143 (-)	1248	WP_051626178.1	glycosyltransferase	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45509.22 Da
• Isoelectric Point: 5.8757

>NTDB_id=556400 J9319_RS17060 WP_035389673.1 3256516..3257691(-) (degS) [Bacillus altitudinis strain 6ww6]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCIGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFVMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=556400 J9319_RS17060 WP_035389673.1 3256516..3257691(-) (degS) [Bacillus altitudinis strain 6ww6]
ATGACAACACCTAAAATGGATCCGAAGTTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGTAAGGA
CGAAGTATTTAGAATCGGCGAACAGTCCCGTCAACAATATGAAAGCCTGGTAGAAGAGCTTAAGCAAATTAAACAGCAAG
TCAACGAAGTAATTGATTTTGGGGATAAACTAGAAGTACATACGAGACATGCTAGAAATCGATTATCTGAGGTCAGCAGA
AACTTCAACAAATTCAGCGAAGAAGAAATACGAGAAGCCTATGAAAAAGCACATAACCTGCAAGTAGAATTGACCATGAT
CCAGCAGCGCGAAAAACAGCTGAGGGAAAGAAGAGATGATCTCGAAAGACGATTGTTAAGCTTACAAGACGTCATTGAAC
GTTCAGAAACGCTTGTGAGCCAGATCACGGTCGTCCTCAACTACTTGAACCAAGATTTACGTCAGGTCGGTGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGACTAAGAATTATTGAAGCCCAAGAAGAAGAGCGCAAAAGGGTATCACGAGA
AATCCATGATGGACCTGCTCAGATGCTGGCAAACGTGATGATGCGTTCAGAGCTAATTGAACGGATTTTTAGAGACCGTG
GAACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTAAGGCAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTCATTCCGACACTTCGAAAATACTTAAACACAATTGAAGAATA
TGATGGAAAAACCAAAATTACGTTCCAGTGCATAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TATTTAGACTAGCTCAAGAAGCTGTCACAAACTCTTTAAAGCATTCTGAAGCTGAAGAAATCTCTGTGAAGGTTGAAGTG
ACGAAAGACTTTGTAACCTTAATTATCAAAGACGATGGAAAAGGCTTTGATATGAAGGATGTTAAAACAAATAAAAACAA
ATCCTTTGGGTTACTAGGTATGAAAGAGCGCGTAGACTTACTAGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCGTCATGATTAGAGTACCGTTAACATTACAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841