Detailed information NTG0552242

Bioinformatically predicted

Overview

• Name: ruvA
• Type: Machinery gene
• Locus tag: LUV29_RS15055
• Genome accession: NZ_CP089592
• Coordinates: 2840762..2841367 (-)
• Length: 201 a.a.
• NCBI ID: WP_003229717.1
• Uniprot ID: O05392
• Organism: Bacillus subtilis strain Bsi
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 2835762..2846367

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LUV29_RS15025 (LUV29_15025)	-	2836575..2836964 (+)	390	WP_004398667.1	TIGR04086 family membrane protein	-
LUV29_RS15030 (LUV29_15030)	yajC	2837021..2837287 (-)	267	WP_004398708.1	preprotein translocase subunit YajC	-
LUV29_RS15035 (LUV29_15035)	tgt	2837324..2838469 (-)	1146	WP_003229725.1	tRNA guanosine(34) transglycosylase Tgt	-
LUV29_RS15040 (LUV29_15040)	queA	2838496..2839524 (-)	1029	WP_003229723.1	tRNA preQ1(34) S-adenosylmethionine ribosyltransferase-isomerase QueA	-
LUV29_RS15045 (LUV29_15045)	yrzS	2839554..2839754 (-)	201	WP_003222669.1	DUF2905 domain-containing protein	-
LUV29_RS15050 (LUV29_15050)	ruvB	2839747..2840751 (-)	1005	WP_003229718.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
LUV29_RS15055 (LUV29_15055)	ruvA	2840762..2841367 (-)	606	WP_003229717.1	Holliday junction branch migration protein RuvA	Machinery gene
LUV29_RS15060 (LUV29_15060)	bofC	2841506..2842018 (-)	513	WP_003229715.1	sporulation cell-cell signaling protein BofC	-
LUV29_RS15065 (LUV29_15065)	csbX	2842066..2843373 (-)	1308	WP_003246197.1	MFS transporter	-
LUV29_RS15070 (LUV29_15070)	iolG	2843444..2844469 (-)	1026	WP_004398990.1	inositol 2-dehydrogenase	-
LUV29_RS15075 (LUV29_15075)	yrzF	2844707..2845354 (+)	648	WP_003246159.1	phosphotransferase	-
LUV29_RS15080 (LUV29_15080)	-	2845400..2845522 (-)	123	WP_003229707.1	hypothetical protein	-
LUV29_RS15085 (LUV29_15085)	-	2845502..2845897 (+)	396	WP_220096631.1	DUF5412 family protein	-
LUV29_RS15090 (LUV29_15090)	-	2845904..2846044 (+)	141	WP_004398683.1	hypothetical protein	-

Sequence

Protein

• Length: 201 a.a.
• Molecular weight: 22584.08 Da
• Isoelectric Point: 5.4072

>NTDB_id=552242 LUV29_RS15055 WP_003229717.1 2840762..2841367(-) (ruvA) [Bacillus subtilis strain Bsi]
MIEFVKGTIDYVSPQYIVIENGGIGYQIFTPNPFIYKERSQETIFTYHHIREDAFSLYGFSTREEKALFTKLLNVTGIGP
KGALAILGSGDPGAVIQAIENEDEAFLVKFPGVGKKTARQIILDLKGKLADVVPEMIENLFNHEERLEKQTAETALEEAL
EALRVLGYAEKEIKKVLPHLKEEIGLTTDQYVKKALQKLLK

Nucleotide

• Length: 606 bp

>NTDB_id=552242 LUV29_RS15055 WP_003229717.1 2840762..2841367(-) (ruvA) [Bacillus subtilis strain Bsi]
GTGATTGAATTTGTTAAAGGGACGATTGATTATGTATCTCCCCAATATATTGTCATAGAGAACGGCGGCATCGGCTATCA
GATTTTCACGCCGAATCCGTTTATATATAAGGAGAGAAGCCAAGAAACGATTTTTACATACCATCATATCAGAGAGGATG
CTTTTTCGCTTTATGGTTTTTCAACAAGAGAGGAGAAGGCGCTCTTTACAAAGCTGTTAAACGTGACCGGAATTGGCCCG
AAAGGAGCACTTGCCATCTTGGGCTCGGGTGATCCCGGAGCGGTCATCCAAGCAATTGAAAATGAAGATGAAGCTTTTTT
GGTCAAGTTTCCTGGAGTAGGAAAGAAAACCGCACGCCAGATTATTCTAGATTTAAAAGGAAAGCTGGCAGATGTTGTGC
CTGAAATGATTGAAAATCTGTTTAATCATGAAGAAAGGCTTGAAAAGCAAACAGCGGAAACGGCTCTTGAAGAAGCACTT
GAAGCCCTCAGGGTTCTCGGATATGCTGAAAAAGAAATCAAAAAGGTGCTTCCTCACCTTAAAGAAGAAATTGGGCTGAC
AACAGACCAATATGTGAAAAAAGCATTACAAAAACTATTAAAGTAA

Domains

Predicted by InterProScan.

• RuvA, C-terminal domain (RuvA_C) (155-199)

• RuvA N terminal domain (RuvA_N) (1-59)

• Helix-hairpin-helix domain (HHH_5) (69-126)

3D structure

• AlphaFold DB: O05392

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvA	Bacillus subtilis subsp. subtilis str. 168	100	100	1
ruvA	Streptococcus pneumoniae TIGR4	39.806	100	0.408
ruvA	Streptococcus pneumoniae R6	39.806	100	0.408
ruvA	Streptococcus pneumoniae D39	39.806	100	0.408