Detailed information
Bioinformatically predicted
Overview
| Name | dprA | Type | Machinery gene |
| Locus tag | J5A60_RS01340 | Genome accession | NZ_CP072381 |
| Coordinates | 247139..248254 (-) | Length | 371 a.a. |
| NCBI ID | WP_212510323.1 | Uniprot ID | - |
| Organism | Aggregatibacter sp. oral taxon 513 strain W11186 | ||
| Function | ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing |
||
Genomic Context
Location: 242139..253254
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| J5A60_RS01315 (J5A60_01315) | yggU | 242536..242829 (+) | 294 | WP_212510321.1 | DUF167 family protein YggU | - |
| J5A60_RS01320 (J5A60_01320) | - | 242948..243607 (+) | 660 | WP_111306096.1 | NAD(P)H-dependent oxidoreductase | - |
| J5A60_RS01325 (J5A60_01325) | - | 243677..245650 (+) | 1974 | WP_212510322.1 | LTA synthase family protein | - |
| J5A60_RS01330 (J5A60_01330) | - | 245882..246172 (+) | 291 | WP_048750016.1 | hypothetical protein | - |
| J5A60_RS01335 (J5A60_01335) | - | 246328..246918 (+) | 591 | WP_212510730.1 | sigma-70 family RNA polymerase sigma factor | - |
| J5A60_RS01340 (J5A60_01340) | dprA | 247139..248254 (-) | 1116 | WP_212510323.1 | DNA-processing protein DprA | Machinery gene |
| J5A60_RS01345 (J5A60_01345) | rplI | 248469..248918 (-) | 450 | WP_006716790.1 | 50S ribosomal protein L9 | - |
| J5A60_RS01350 (J5A60_01350) | rpsR | 248934..249164 (-) | 231 | WP_005541294.1 | 30S ribosomal protein S18 | - |
| J5A60_RS01355 (J5A60_01355) | priB | 249177..249503 (-) | 327 | WP_109432648.1 | primosomal replication protein N | - |
| J5A60_RS01360 (J5A60_01360) | rpsF | 249490..249867 (-) | 378 | WP_005555822.1 | 30S ribosomal protein S6 | - |
| J5A60_RS01365 (J5A60_01365) | lexA | 250019..250642 (-) | 624 | WP_006716824.1 | transcriptional repressor LexA | - |
Sequence
Protein
Download Length: 371 a.a. Molecular weight: 41843.83 Da Isoelectric Point: 5.9589
>NTDB_id=552238 J5A60_RS01340 WP_212510323.1 247139..248254(-) (dprA) [Aggregatibacter sp. oral taxon 513 strain W11186]
MKNHLPLLLRLLQIPKLGPTSIQKILDQVNLSDLQDYDVTAFKHIGWNAQQIQAWFNPEKRYIEPALLWREKEGNHILDY
YHPDYPEQLKQIDSAPPVLFVKGETSTLSHPQIAIVGSRQCSSYGEYWAKYFASELTTNGLIITSGLALGIDGFCHQAAV
DLRQPTIAVLGSGLEEVYPAKHRKLAQHIIEQGGSLVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMAWEKHLKNRPHFSSPTAISPQQEEKVPPTY
PELYQAIGYTPISIDSLSSTLNLSVEQLLIQLLELELQELIYSENGLYRRT
MKNHLPLLLRLLQIPKLGPTSIQKILDQVNLSDLQDYDVTAFKHIGWNAQQIQAWFNPEKRYIEPALLWREKEGNHILDY
YHPDYPEQLKQIDSAPPVLFVKGETSTLSHPQIAIVGSRQCSSYGEYWAKYFASELTTNGLIITSGLALGIDGFCHQAAV
DLRQPTIAVLGSGLEEVYPAKHRKLAQHIIEQGGSLVSEFFPLQPPIAENFPRRNRIISGLSLATLIIEATERSGSLITA
RYALEQNREIFALPGNIQSQFSQGCHKLIKQGAMLVENVEDILENLAPQMAWEKHLKNRPHFSSPTAISPQQEEKVPPTY
PELYQAIGYTPISIDSLSSTLNLSVEQLLIQLLELELQELIYSENGLYRRT
Nucleotide
Download Length: 1116 bp
>NTDB_id=552238 J5A60_RS01340 WP_212510323.1 247139..248254(-) (dprA) [Aggregatibacter sp. oral taxon 513 strain W11186]
ATGAAGAACCATTTACCTCTTTTACTTCGCCTATTACAAATTCCGAAACTAGGCCCAACCTCAATTCAAAAAATACTTGA
TCAAGTAAATTTATCTGATTTACAAGATTACGATGTTACCGCATTCAAACATATAGGTTGGAATGCCCAACAAATCCAAG
CGTGGTTCAATCCTGAAAAACGCTATATTGAACCGGCACTTTTATGGAGAGAAAAAGAAGGAAATCATATTCTTGATTAT
TATCATCCGGACTATCCTGAGCAATTAAAACAAATTGACAGCGCGCCACCTGTGTTATTCGTCAAAGGTGAAACATCCAC
CTTATCTCACCCACAGATTGCTATCGTTGGCAGTCGCCAATGTTCTAGTTATGGGGAATACTGGGCAAAGTATTTTGCCT
CAGAACTAACAACCAATGGTTTGATCATTACCAGTGGGCTCGCCTTAGGCATTGACGGATTTTGCCATCAAGCCGCTGTA
GATTTGAGACAGCCGACTATCGCGGTATTAGGGAGTGGTTTGGAAGAGGTTTATCCGGCGAAACACCGTAAATTAGCACA
ACACATCATTGAGCAAGGTGGTTCGTTAGTTTCTGAGTTTTTCCCGTTGCAACCGCCTATCGCAGAAAACTTTCCCCGCC
GTAATCGCATTATTAGCGGATTATCTCTCGCAACGTTAATTATCGAAGCCACTGAACGTAGCGGATCTTTAATCACCGCT
CGTTATGCTCTGGAACAAAACCGAGAAATTTTTGCTCTACCCGGCAATATCCAAAGTCAATTTAGCCAAGGCTGCCATAA
ACTTATTAAACAAGGCGCGATGCTAGTAGAAAATGTAGAAGATATTTTAGAAAACCTTGCACCACAAATGGCATGGGAAA
AACACCTGAAAAATAGACCGCACTTTTCTTCCCCAACGGCCATTTCTCCGCAACAAGAGGAAAAGGTACCACCTACTTAT
CCTGAACTTTATCAAGCGATTGGGTATACGCCAATCAGCATTGATTCCCTCTCTAGCACACTCAATTTGTCGGTGGAGCA
ACTTCTTATTCAGCTTTTAGAATTAGAACTTCAAGAACTGATTTACAGTGAAAACGGGTTATACCGCCGCACTTAA
ATGAAGAACCATTTACCTCTTTTACTTCGCCTATTACAAATTCCGAAACTAGGCCCAACCTCAATTCAAAAAATACTTGA
TCAAGTAAATTTATCTGATTTACAAGATTACGATGTTACCGCATTCAAACATATAGGTTGGAATGCCCAACAAATCCAAG
CGTGGTTCAATCCTGAAAAACGCTATATTGAACCGGCACTTTTATGGAGAGAAAAAGAAGGAAATCATATTCTTGATTAT
TATCATCCGGACTATCCTGAGCAATTAAAACAAATTGACAGCGCGCCACCTGTGTTATTCGTCAAAGGTGAAACATCCAC
CTTATCTCACCCACAGATTGCTATCGTTGGCAGTCGCCAATGTTCTAGTTATGGGGAATACTGGGCAAAGTATTTTGCCT
CAGAACTAACAACCAATGGTTTGATCATTACCAGTGGGCTCGCCTTAGGCATTGACGGATTTTGCCATCAAGCCGCTGTA
GATTTGAGACAGCCGACTATCGCGGTATTAGGGAGTGGTTTGGAAGAGGTTTATCCGGCGAAACACCGTAAATTAGCACA
ACACATCATTGAGCAAGGTGGTTCGTTAGTTTCTGAGTTTTTCCCGTTGCAACCGCCTATCGCAGAAAACTTTCCCCGCC
GTAATCGCATTATTAGCGGATTATCTCTCGCAACGTTAATTATCGAAGCCACTGAACGTAGCGGATCTTTAATCACCGCT
CGTTATGCTCTGGAACAAAACCGAGAAATTTTTGCTCTACCCGGCAATATCCAAAGTCAATTTAGCCAAGGCTGCCATAA
ACTTATTAAACAAGGCGCGATGCTAGTAGAAAATGTAGAAGATATTTTAGAAAACCTTGCACCACAAATGGCATGGGAAA
AACACCTGAAAAATAGACCGCACTTTTCTTCCCCAACGGCCATTTCTCCGCAACAAGAGGAAAAGGTACCACCTACTTAT
CCTGAACTTTATCAAGCGATTGGGTATACGCCAATCAGCATTGATTCCCTCTCTAGCACACTCAATTTGTCGGTGGAGCA
ACTTCTTATTCAGCTTTTAGAATTAGAACTTCAAGAACTGATTTACAGTGAAAACGGGTTATACCGCCGCACTTAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| dprA | Haemophilus influenzae Rd KW20 |
60.109 |
98.652 |
0.593 |
| dprA | Glaesserella parasuis strain SC1401 |
55.524 |
95.148 |
0.528 |
| dprA | Vibrio campbellii strain DS40M4 |
45.455 |
97.844 |
0.445 |
| dprA | Vibrio cholerae strain A1552 |
43.011 |
100 |
0.431 |
| dprA | Legionella pneumophila strain ERS1305867 |
40.909 |
100 |
0.412 |