Detailed information NTG0055111

Bioinformatically predicted

Overview

• Name: radC
• Type: Machinery gene
• Locus tag: ANG_RS06595
• Genome accession: NZ_AP013072
• Coordinates: 1292199..1292879 (-)
• Length: 226 a.a.
• NCBI ID: WP_003033331.1
• Uniprot ID: I0SM71
• Organism: Streptococcus anginosus subsp. whileyi MAS624
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1287199..1297879

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
ANG_RS06565 (ANG_1330)	-	1287598..1288158 (+)	561	WP_003033316.1	CYTH domain-containing protein	-
ANG_RS06570 (ANG_1331)	-	1288242..1289201 (+)	960	WP_025271840.1	ribose-phosphate diphosphokinase	-
ANG_RS06575 (ANG_1332)	-	1289211..1290326 (+)	1116	WP_003033292.1	cysteine desulfurase family protein	-
ANG_RS06580 (ANG_1333)	-	1290331..1290678 (+)	348	WP_003033258.1	DUF1831 domain-containing protein	-
ANG_RS06585 (ANG_1334)	-	1290842..1291486 (+)	645	WP_006267105.1	redox-sensing transcriptional repressor Rex	-
ANG_RS06590 (ANG_1335)	-	1291514..1292202 (+)	689	Protein_1288	gamma-glutamyl-gamma-aminobutyrate hydrolase family protein	-
ANG_RS06595 (ANG_1336)	radC	1292199..1292879 (-)	681	WP_003033331.1	RadC family protein	Machinery gene
ANG_RS06600 (ANG_1337)	phoU	1292966..1293619 (-)	654	WP_003033270.1	phosphate signaling complex protein PhoU	-
ANG_RS06605 (ANG_1338)	pstB	1293777..1294535 (-)	759	WP_003033290.1	phosphate ABC transporter ATP-binding protein PstB	-
ANG_RS06610 (ANG_1339)	pstB	1294578..1295381 (-)	804	WP_003033284.1	phosphate ABC transporter ATP-binding protein PstB	-
ANG_RS06615 (ANG_1340)	pstA	1295393..1296277 (-)	885	WP_003033308.1	phosphate ABC transporter permease PstA	-
ANG_RS06620 (ANG_1341)	pstC	1296267..1297178 (-)	912	WP_003024154.1	phosphate ABC transporter permease subunit PstC	-

Sequence

Protein

• Length: 226 a.a.
• Molecular weight: 25557.43 Da
• Isoelectric Point: 6.5888

>NTDB_id=55111 ANG_RS06595 WP_003033331.1 1292199..1292879(-) (radC) [Streptococcus anginosus subsp. whileyi MAS624]
MYSISFQEDSLLPRERLVAEGAEQLSNQELLSILIRTGNKKETVFQVSQRILSTISSLNDLRNMTLQELQSISGIGRVKA
IELQAMIELGQRVSKAELITQEQILGSQKLAKKMQQELGHKKQEHLVALYLNTQNKIIHQQTIFIGSVSSSIAEPREILH
YAVKHMATSIILVHNHPSGAVLPSKNDDEVTKHVKEACELMGFILLDHLIVAEKDYYSYREETDLI

Nucleotide

• Length: 681 bp

>NTDB_id=55111 ANG_RS06595 WP_003033331.1 1292199..1292879(-) (radC) [Streptococcus anginosus subsp. whileyi MAS624]
ATGTATAGTATTTCATTTCAGGAAGATTCTTTGTTGCCAAGGGAACGTTTAGTTGCAGAAGGTGCAGAACAATTGAGCAA
TCAAGAATTGTTATCCATTCTTATCCGCACGGGCAATAAAAAAGAAACTGTTTTTCAAGTTTCTCAACGAATTTTATCAA
CTATTTCTAGTTTGAATGATTTGCGCAATATGACGCTACAAGAATTGCAATCAATCTCTGGAATTGGTCGTGTCAAAGCT
ATTGAATTACAAGCTATGATTGAATTAGGACAGCGAGTCAGTAAGGCAGAATTGATTACGCAAGAGCAAATTTTAGGTAG
TCAAAAGCTGGCGAAAAAAATGCAACAAGAATTGGGGCATAAGAAGCAGGAACACCTTGTGGCTTTATATCTGAATACTC
AAAACAAAATCATTCATCAGCAGACGATTTTTATCGGTAGTGTGTCAAGCAGTATTGCAGAGCCACGAGAAATCCTGCAT
TATGCTGTAAAACACATGGCGACATCCATTATTTTGGTGCACAATCATCCGTCAGGAGCTGTACTGCCAAGCAAAAATGA
CGATGAAGTGACCAAACATGTAAAAGAAGCGTGTGAATTAATGGGCTTCATCTTACTGGATCATCTCATCGTCGCAGAGA
AAGATTATTATAGTTATCGCGAAGAAACAGACTTGATTTAA

Domains

Predicted by InterProScan.

• RadC-like JAB domain (RadC) (107-222)

• UPF0758 N-terminal (UPF0758_N) (13-81)

3D structure

• AlphaFold DB: I0SM71

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
radC	Streptococcus gordonii str. Challis substr. CH1	79.646	100	0.796
radC	Streptococcus pneumoniae TIGR4	77.434	100	0.774
radC	Streptococcus pneumoniae R6	76.991	100	0.77
radC	Streptococcus pneumoniae D39	76.991	100	0.77
ysxA/radC	Bacillus subtilis subsp. subtilis str. 168	46.698	93.805	0.438