Detailed information    

insolico Bioinformatically predicted

Overview

Name   uvrB   Type   Machinery gene
Locus tag   ANG_RS04510 Genome accession   NZ_AP013072
Coordinates   889004..890992 (+) Length   662 a.a.
NCBI ID   WP_003035610.1    Uniprot ID   I0SES4
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context

Location: 884004..895992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS04495 (ANG_0900) - 884871..885611 (-) 741 WP_003035612.1 amino acid ABC transporter ATP-binding protein -
  ANG_RS04500 (ANG_0901) - 885611..887788 (-) 2178 WP_003035613.1 ABC transporter substrate-binding protein/permease -
  ANG_RS04505 (ANG_0902) - 887954..888913 (+) 960 WP_020999576.1 CPBP family intramembrane glutamic endopeptidase -
  ANG_RS04510 (ANG_0903) uvrB 889004..890992 (+) 1989 WP_003035610.1 excinuclease ABC subunit UvrB Machinery gene
  ANG_RS04515 - 891023..891568 (+) 546 Protein_870 DUF1697 domain-containing protein -
  ANG_RS04520 (ANG_0906) pptA 891698..892441 (+) 744 WP_003035673.1 ABC transporter ATP-binding protein Regulator
  ANG_RS04525 (ANG_0907) - 892431..894053 (+) 1623 WP_003035628.1 hypothetical protein -
  ANG_RS04530 (ANG_0908) hemW 894196..895326 (+) 1131 WP_003035604.1 radical SAM family heme chaperone HemW -

Sequence

Protein


Download         Length: 662 a.a.        Molecular weight: 75721.58 Da        Isoelectric Point: 4.4684

>NTDB_id=55097 ANG_RS04510 WP_003035610.1 889004..890992(+) (uvrB) [Streptococcus anginosus subsp. whileyi MAS624]
MINRITDNKFKLVSKYEPSGDQPQAIEQLVDNIEGGEKAQILMGATGTGKTYTMSQVIQKVNKPTLVIAHNKTLAGQLYG
EFKEFFPDNAVEYFVSYYDYYQPEAYVPSSDTYIEKDSSVNDEIDKLRHSATSALLERNDVIVVASVSCIYGLGSPKEYS
DSVVSLRPGLEISRDQLLNDLVDIQFERNDIDFQRGKFRVRGDVVEIFPASRDEHAFRVEFFGDEIDRIREVEALTGQVL
GEVDHLAIFPATHFMTNDENMEIAIGKIQSELEDQLAFFEREGKLLEAQRLKQRTDYDIEMLREMGYTNGVENYSRHMDG
RSEGEPPYTLLDFFPDDFLIMVDESHMTMGQIKGMYNGDRSRKEMLVNYGFRLPSALDNRPLRREEFESHVHQIVYVSAT
PGDYEREQTDTVIEQIIRPTGLLDPEVEVRPTMGQIDDLLGEINARAEKNERTFITTLTKKMAEDLTDYFKEMGVKVKYM
HSDIKTLERTEIIRDLRLGVFDVLVGINLLREGIDVPEVSLVAILDADKEGFLRNERGLIQTIGRAARNSEGHVIMYADT
ITDSMQKAMDETARRRQIQMAYNEEHDIVPQTIQKEIRDLISVTKAALPDKEEVVDIESLNKQERKDMIKKLEGQMQEAA
GLLDFELAAQIRDMILEIKAVD

Nucleotide


Download         Length: 1989 bp        

>NTDB_id=55097 ANG_RS04510 WP_003035610.1 889004..890992(+) (uvrB) [Streptococcus anginosus subsp. whileyi MAS624]
ATGATAAATAGAATTACGGACAATAAATTTAAATTAGTTTCCAAGTATGAGCCTTCAGGAGATCAACCACAGGCGATTGA
GCAATTAGTGGATAATATAGAGGGTGGTGAGAAAGCTCAGATTCTCATGGGAGCGACAGGAACTGGGAAGACCTACACTA
TGAGTCAGGTCATCCAAAAGGTCAATAAACCGACCCTAGTTATCGCTCATAATAAAACCCTGGCTGGTCAGCTCTATGGT
GAATTTAAGGAGTTTTTTCCTGACAATGCGGTAGAGTATTTTGTGTCTTACTATGACTATTACCAACCGGAAGCCTATGT
GCCTTCTAGTGATACCTATATTGAGAAGGACAGCTCGGTCAATGATGAGATTGACAAACTTCGTCACTCAGCAACCTCGG
CTCTCTTGGAGCGCAACGATGTGATTGTTGTGGCATCAGTCAGCTGCATTTATGGTTTGGGCTCGCCTAAGGAATACTCC
GATAGCGTGGTCAGTCTGCGACCTGGTTTAGAGATTTCACGGGATCAACTTCTCAATGATTTGGTTGATATTCAATTTGA
GCGCAATGATATTGACTTTCAGCGGGGAAAATTTCGTGTGCGTGGCGATGTTGTGGAAATCTTCCCAGCTTCTCGCGATG
AACATGCCTTTCGGGTGGAATTTTTCGGTGATGAAATTGACCGCATTCGAGAAGTGGAAGCATTGACAGGTCAAGTGTTG
GGCGAAGTAGACCATTTAGCTATTTTTCCTGCCACTCACTTTATGACCAATGACGAAAATATGGAAATTGCCATTGGTAA
AATTCAATCAGAATTAGAAGATCAGCTAGCCTTTTTTGAAAGAGAAGGGAAGCTTTTAGAAGCTCAGCGGTTGAAGCAAA
GAACGGACTATGATATTGAAATGCTGCGCGAAATGGGCTACACGAATGGTGTAGAGAATTATTCTCGCCACATGGACGGA
CGGAGTGAAGGTGAGCCACCTTACACTTTATTAGATTTCTTTCCTGATGATTTTTTAATCATGGTAGACGAAAGTCACAT
GACTATGGGGCAAATCAAAGGTATGTATAATGGTGACCGTTCTCGGAAAGAAATGTTGGTTAATTATGGATTTCGCTTAC
CTTCTGCCTTGGATAACCGTCCGTTGCGTCGGGAAGAATTTGAAAGTCATGTGCACCAGATTGTCTATGTATCTGCGACA
CCGGGCGACTATGAGCGGGAGCAAACGGATACGGTGATTGAGCAAATTATTCGACCAACTGGACTGCTGGATCCAGAAGT
TGAAGTGCGTCCGACTATGGGGCAAATAGATGATCTTTTAGGAGAAATCAATGCGCGTGCAGAGAAGAATGAGCGGACTT
TTATCACAACGTTGACTAAAAAGATGGCAGAAGATCTGACGGATTACTTTAAAGAAATGGGTGTTAAGGTCAAATACATG
CACTCAGATATCAAGACTTTAGAGCGGACAGAAATTATCCGCGACCTGCGGTTAGGTGTCTTTGATGTTTTAGTCGGAAT
TAACCTGTTGCGTGAGGGAATTGATGTGCCAGAGGTTAGTCTGGTTGCCATTCTTGATGCAGACAAGGAAGGCTTCCTCC
GCAATGAGCGTGGTTTGATCCAAACCATTGGTCGGGCTGCCCGTAATAGTGAAGGCCACGTCATCATGTATGCTGACACG
ATCACAGATTCCATGCAAAAAGCTATGGATGAAACTGCCCGTCGTCGTCAGATTCAAATGGCTTATAACGAAGAACATGA
TATTGTACCGCAAACAATCCAGAAAGAAATTCGTGATTTAATCAGTGTGACAAAAGCAGCTCTACCAGACAAGGAAGAAG
TGGTAGATATTGAAAGTCTTAACAAGCAGGAACGCAAGGATATGATTAAAAAGCTAGAAGGACAAATGCAAGAAGCTGCT
GGTCTTCTGGACTTCGAGCTGGCCGCCCAAATCCGCGATATGATTTTGGAGATTAAGGCGGTGGATTAG

Domains

Predicted by InterProScan.

Type III restriction enzyme, res subunit (ResIII)

(17-143)

Helicase conserved C-terminal domain (Helicase_C)

(443-549)

Ultra-violet resistance protein B (UvrB)

(556-598)

UvrB/uvrC motif (UVR)

(626-660)

UvrB interaction domain (UvrB_inter)

(164-254)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB I0SES4

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  uvrB Streptococcus pneumoniae R6

92.447

100

0.924
  uvrB Streptococcus pneumoniae D39

92.447

100

0.924
  uvrB Streptococcus pneumoniae TIGR4

92.296

100

0.923

Multiple sequence alignment