Detailed information    

insolico Bioinformatically predicted

Overview


Name   ruvA   Type   Machinery gene
Locus tag   ANG_RS01210 Genome accession   NZ_AP013072
Coordinates   228608..229198 (+) Length   196 a.a.
NCBI ID   WP_003038332.1    Uniprot ID   I0S7L7
Organism   Streptococcus anginosus subsp. whileyi MAS624     
Function   homologous recombination (predicted from homology)   
Homologous recombination

Genomic Context


Location: 223608..234198
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  ANG_RS01195 (ANG_0218) - 224507..225655 (+) 1149 WP_003038317.1 tyrosine-type recombinase/integrase -
  ANG_RS01200 (ANG_0219) hexB 225750..227696 (+) 1947 WP_025271565.1 DNA mismatch repair endonuclease MutL Machinery gene
  ANG_RS01205 - 228171..228509 (-) 339 WP_003038373.1 hypothetical protein -
  ANG_RS01210 (ANG_0220) ruvA 228608..229198 (+) 591 WP_003038332.1 Holliday junction branch migration protein RuvA Machinery gene
  ANG_RS01215 (ANG_0221) - 229209..229781 (+) 573 WP_003038379.1 DNA-3-methyladenine glycosylase I -
  ANG_RS01220 - 229890..230303 (-) 414 Protein_220 EamA family transporter -
  ANG_RS01225 (ANG_0223) cinA 230901..232169 (+) 1269 WP_003038347.1 competence/damage-inducible protein A Machinery gene
  ANG_RS01230 (ANG_0224) recA 232213..233361 (+) 1149 WP_038677164.1 recombinase RecA Machinery gene
  ANG_RS01235 (ANG_0225) spx 233448..233846 (+) 399 WP_003026638.1 transcriptional regulator Spx -

Sequence


Protein


Download         Length: 196 a.a.        Molecular weight: 21568.99 Da        Isoelectric Point: 6.4894

>NTDB_id=55064 ANG_RS01210 WP_003038332.1 228608..229198(+) (ruvA) [Streptococcus anginosus subsp. whileyi MAS624]
MYEYFKGILSKITAKYIVVEVGQIGYTLHVANPYAYSGQVNQEIQVFVHQVVREDAQLLYGFRTEDEKQLFLNLISVSGI
GPVSALAIIAADDNAGLVQAIEQKNITYLTKFPKIGKKTAQQMVLDLEGKVVATGVAPKQVAVAATSDNQELEEAMEAML
ALGYKAAELKKIKKFFEGTNDTAENYIKSALKMLVK

Nucleotide


Download         Length: 591 bp        

>NTDB_id=55064 ANG_RS01210 WP_003038332.1 228608..229198(+) (ruvA) [Streptococcus anginosus subsp. whileyi MAS624]
ATGTACGAATATTTTAAAGGAATTTTAAGTAAAATCACAGCCAAATATATTGTAGTGGAGGTGGGGCAAATTGGCTATAC
CCTGCATGTGGCAAATCCCTATGCCTATTCAGGTCAGGTCAATCAGGAGATTCAAGTTTTTGTTCATCAGGTGGTCAGAG
AGGATGCCCAGCTCCTCTACGGTTTTCGCACAGAGGATGAAAAGCAGCTTTTTCTCAATTTGATTTCGGTTTCTGGTATT
GGACCTGTTTCTGCTCTTGCGATAATCGCTGCCGATGATAATGCCGGTTTGGTGCAGGCTATTGAGCAGAAAAACATCAC
TTATCTGACAAAATTTCCTAAAATCGGCAAAAAAACGGCCCAGCAGATGGTGCTGGACTTAGAAGGCAAGGTTGTGGCAA
CAGGTGTTGCTCCTAAGCAAGTTGCTGTTGCAGCTACTAGTGACAATCAAGAATTGGAAGAAGCCATGGAAGCCATGCTA
GCTCTGGGATACAAGGCGGCTGAACTCAAGAAAATTAAGAAATTTTTTGAAGGAACCAATGATACCGCGGAAAACTATAT
CAAATCCGCTCTTAAGATGCTGGTAAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB I0S7L7

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ruvA Streptococcus pneumoniae R6

84.772

100

0.852

  ruvA Streptococcus pneumoniae D39

84.772

100

0.852

  ruvA Streptococcus pneumoniae TIGR4

84.772

100

0.852

  ruvA Bacillus subtilis subsp. subtilis str. 168

40.488

100

0.423


Multiple sequence alignment