Detailed information    

insolico Bioinformatically predicted

Overview


Name   ciaH   Type   Regulator
Locus tag   J5M87_RS05460 Genome accession   NZ_CP072115
Coordinates   1125465..1126859 (-) Length   464 a.a.
NCBI ID   WP_154607993.1    Uniprot ID   A0A6I4RGI1
Organism   Streptococcus zhangguiae strain zg-86     
Function   repress competence development; post-transcriptional repression of CSP production (predicted from homology)   
Competence regulation

Genomic Context


Location: 1120465..1131859
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J5M87_RS05435 (J5M87_05435) - 1120593..1121183 (-) 591 WP_154607989.1 class I SAM-dependent methyltransferase -
  J5M87_RS05440 (J5M87_05440) coaA 1121281..1122201 (+) 921 WP_154607990.1 type I pantothenate kinase -
  J5M87_RS05445 (J5M87_05445) rpsT 1122259..1122507 (+) 249 WP_012027069.1 30S ribosomal protein S20 -
  J5M87_RS05450 (J5M87_05450) - 1122566..1123075 (+) 510 WP_154607991.1 DNA topology modulation protein -
  J5M87_RS05455 (J5M87_05455) - 1123106..1124872 (-) 1767 WP_154607992.1 flavocytochrome c -
  J5M87_RS05460 (J5M87_05460) ciaH 1125465..1126859 (-) 1395 WP_154607993.1 cell wall metabolism sensor histidine kinase WalK Regulator
  J5M87_RS05465 (J5M87_05465) ciaR 1126849..1127523 (-) 675 WP_154607994.1 response regulator transcription factor Regulator
  J5M87_RS05470 (J5M87_05470) phoU 1127930..1128586 (-) 657 WP_154607995.1 phosphate signaling complex protein PhoU -
  J5M87_RS05475 (J5M87_05475) pstB 1128605..1129363 (-) 759 WP_154607996.1 phosphate ABC transporter ATP-binding protein PstB -
  J5M87_RS05480 (J5M87_05480) pstB 1129376..1130179 (-) 804 WP_154607997.1 phosphate ABC transporter ATP-binding protein PstB -
  J5M87_RS05485 (J5M87_05485) pstA 1130195..1131082 (-) 888 WP_154632441.1 phosphate ABC transporter permease PstA -

Sequence


Protein


Download         Length: 464 a.a.        Molecular weight: 53314.39 Da        Isoelectric Point: 8.3378

>NTDB_id=550540 J5M87_RS05460 WP_154607993.1 1125465..1126859(-) (ciaH) [Streptococcus zhangguiae strain zg-86]
MLIKFRKLYRTDNFSYFIRYFAVFTLIFSLMTIIIFQLMRSTMYQTSDENFREIVNNPEMMMEFARARGLSPEAEIIWEK
NTKATKNNSGNSQKEDEKEKSVSFYSSSKIRLNTNYHVILYDSRGNRLNQVDYFSGLSSLILSAKSLNTITECEVTTPFG
EKEYYRCMSIEVPEEAASAYVGLDIKYATVLFNTSQIRFSIASYEATVMIVMIGFWLISIVASIYLSNVSMRPILASFQK
QKEFVENASHELRTPLTVLQNRLESLFRHPEATIMDSSENIASSLAEVRNMRLLTTNLLNLARRDDGLKPEIIAVQPAFF
DEILANYIIMAEENGKILEVNHTVKEVIRTDKTLLKQLLTILVDNAIKYSEDDGHIWIDIQIKDRFLSIKVADNGLGISP
ENKTKIFDRFYRVDKARTRQKGGFGLGLSLAKQIIDTLHGTITVQDHQPKGTVFEVKIPKEYRK

Nucleotide


Download         Length: 1395 bp        

>NTDB_id=550540 J5M87_RS05460 WP_154607993.1 1125465..1126859(-) (ciaH) [Streptococcus zhangguiae strain zg-86]
ATGCTGATTAAATTTCGCAAACTCTATCGTACGGATAATTTTTCTTATTTTATCCGTTATTTTGCTGTCTTTACGCTGAT
TTTCAGCCTGATGACAATCATTATTTTCCAGTTGATGCGTTCAACCATGTATCAGACTTCGGATGAGAATTTTAGAGAAA
TTGTGAATAATCCGGAAATGATGATGGAATTTGCACGGGCGCGCGGCTTGTCTCCAGAAGCAGAAATCATCTGGGAAAAA
AATACAAAGGCTACTAAAAATAATTCAGGGAATTCACAGAAAGAGGATGAGAAAGAGAAGTCTGTTTCCTTTTATTCCAG
TTCTAAAATTCGCCTGAATACGAATTACCATGTTATTCTCTATGATAGCCGTGGAAATCGTCTCAATCAAGTAGACTACT
TTTCTGGTTTATCTAGTCTTATCTTATCTGCTAAGTCACTGAATACCATTACAGAATGTGAAGTAACAACACCTTTTGGA
GAAAAAGAATACTATCGTTGTATGAGTATTGAAGTACCAGAAGAAGCTGCTTCAGCTTATGTGGGTCTAGATATCAAATA
TGCTACCGTTCTCTTTAATACCAGTCAGATTCGCTTCTCTATTGCATCGTATGAAGCGACGGTTATGATCGTCATGATTG
GCTTTTGGTTGATTTCGATTGTCGCAAGTATTTACCTGTCCAATGTCAGTATGCGCCCTATTCTTGCTAGTTTTCAAAAG
CAGAAAGAGTTTGTGGAGAATGCGAGTCATGAATTGCGAACACCGCTTACTGTCCTACAAAACCGTTTGGAAAGTCTTTT
TAGACATCCTGAAGCAACAATTATGGATAGCAGTGAAAATATTGCTTCTAGTCTTGCGGAGGTGCGCAATATGCGCCTTT
TAACAACGAATCTATTAAACCTAGCACGAAGAGATGATGGTTTGAAACCAGAAATTATTGCTGTTCAGCCAGCCTTCTTT
GATGAAATATTGGCAAATTATATCATCATGGCGGAAGAAAATGGAAAGATTTTGGAAGTCAATCATACCGTTAAGGAAGT
GATTCGTACAGATAAGACTCTGCTCAAGCAGTTACTGACGATTTTAGTTGATAATGCGATAAAGTATTCAGAAGATGATG
GACATATCTGGATTGATATTCAGATAAAAGATCGTTTTCTTTCTATTAAAGTAGCCGATAATGGATTGGGCATTAGTCCA
GAAAATAAAACAAAAATCTTTGATCGTTTCTACCGGGTTGATAAAGCGAGAACGCGTCAAAAAGGTGGATTCGGCCTCGG
TCTCTCTCTTGCGAAGCAAATCATTGATACCTTACATGGAACAATTACCGTTCAAGATCATCAGCCCAAAGGCACTGTTT
TTGAAGTTAAGATTCCTAAAGAATACCGTAAATAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB A0A6I4RGI1

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  ciaH Streptococcus pneumoniae Rx1

50.218

98.707

0.496

  ciaH Streptococcus pneumoniae D39

50.218

98.707

0.496

  ciaH Streptococcus pneumoniae R6

50.218

98.707

0.496

  ciaH Streptococcus pneumoniae TIGR4

50.218

98.707

0.496

  ciaH Streptococcus mutans UA159

50

98.707

0.494