Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | CYAN10605_RS12930 | Genome accession | NC_019776 |
| Coordinates | 3092840..3093199 (+) | Length | 119 a.a. |
| NCBI ID | WP_015220395.1 | Uniprot ID | A0A844GR21 |
| Organism | Cyanobacterium aponinum PCC 10605 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 3087840..3098199
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| CYAN10605_RS12915 (Cyan10605_2594) | - | 3089031..3089324 (+) | 294 | WP_015220392.1 | four helix bundle protein | - |
| CYAN10605_RS12920 (Cyan10605_2595) | - | 3089709..3091208 (+) | 1500 | WP_015220393.1 | AAA family ATPase | - |
| CYAN10605_RS12925 (Cyan10605_2596) | - | 3091496..3092698 (+) | 1203 | WP_015220394.1 | response regulator | - |
| CYAN10605_RS12930 (Cyan10605_2597) | pilH | 3092840..3093199 (+) | 360 | WP_015220395.1 | response regulator transcription factor | Machinery gene |
| CYAN10605_RS12935 (Cyan10605_2598) | - | 3093571..3094110 (+) | 540 | WP_015220396.1 | chemotaxis protein CheW | - |
| CYAN10605_RS12940 (Cyan10605_2599) | pheT | 3094427..3096862 (+) | 2436 | WP_015220397.1 | phenylalanine--tRNA ligase subunit beta | - |
| CYAN10605_RS12945 (Cyan10605_2600) | - | 3096983..3097675 (-) | 693 | WP_015220398.1 | ABC transporter ATP-binding protein | - |
| CYAN10605_RS12950 (Cyan10605_2601) | - | 3097727..3098011 (-) | 285 | WP_015220399.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 119 a.a. Molecular weight: 12850.87 Da Isoelectric Point: 4.7399
>NTDB_id=55040 CYAN10605_RS12930 WP_015220395.1 3092840..3093199(+) (pilH) [Cyanobacterium aponinum PCC 10605]
MGNALIVDDSSTERKILTGYLQELGISVTTAESGEEALEKIKGNTPDLVVLDVVLPGKSGFEVCREIKSGTNTGKIPIIM
CSTKGSEMDKFWGMKQGADAYIPKPVDKEEFLSAVKKLI
MGNALIVDDSSTERKILTGYLQELGISVTTAESGEEALEKIKGNTPDLVVLDVVLPGKSGFEVCREIKSGTNTGKIPIIM
CSTKGSEMDKFWGMKQGADAYIPKPVDKEEFLSAVKKLI
Nucleotide
Download Length: 360 bp
>NTDB_id=55040 CYAN10605_RS12930 WP_015220395.1 3092840..3093199(+) (pilH) [Cyanobacterium aponinum PCC 10605]
ATGGGAAACGCATTAATTGTTGACGATTCTTCCACTGAAAGAAAAATTTTAACAGGTTATTTACAAGAATTGGGTATTAG
TGTTACAACTGCCGAAAGTGGAGAAGAAGCCCTCGAAAAAATCAAAGGTAATACCCCAGACCTCGTCGTTTTAGATGTAG
TCTTGCCGGGGAAAAGTGGTTTTGAAGTATGTCGAGAAATAAAATCAGGTACAAACACGGGTAAAATACCAATCATTATG
TGTTCTACAAAAGGTAGTGAAATGGACAAATTTTGGGGAATGAAGCAAGGTGCAGATGCTTATATTCCTAAACCAGTGGA
TAAAGAAGAATTCCTCAGTGCTGTCAAAAAACTGATTTAG
ATGGGAAACGCATTAATTGTTGACGATTCTTCCACTGAAAGAAAAATTTTAACAGGTTATTTACAAGAATTGGGTATTAG
TGTTACAACTGCCGAAAGTGGAGAAGAAGCCCTCGAAAAAATCAAAGGTAATACCCCAGACCTCGTCGTTTTAGATGTAG
TCTTGCCGGGGAAAAGTGGTTTTGAAGTATGTCGAGAAATAAAATCAGGTACAAACACGGGTAAAATACCAATCATTATG
TGTTCTACAAAAGGTAGTGAAATGGACAAATTTTGGGGAATGAAGCAAGGTGCAGATGCTTATATTCCTAAACCAGTGGA
TAAAGAAGAATTCCTCAGTGCTGTCAAAAAACTGATTTAG
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
52.101 |
100 |
0.521 |
| vicR | Streptococcus mutans UA159 |
41.379 |
97.479 |
0.403 |
| micA | Streptococcus pneumoniae Cp1015 |
39.496 |
100 |
0.395 |
| pilG | Acinetobacter baumannii strain A118 |
38.261 |
96.639 |
0.37 |