Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | MIC7113_RS06435 | Genome accession | NC_019738 |
| Coordinates | 1516733..1517098 (+) | Length | 121 a.a. |
| NCBI ID | WP_015181369.1 | Uniprot ID | K9WBR8 |
| Organism | Allocoleopsis franciscana PCC 7113 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1511733..1522098
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MIC7113_RS06420 (Mic7113_1321) | - | 1513511..1513903 (-) | 393 | WP_155897948.1 | nuclear transport factor 2 family protein | - |
| MIC7113_RS06425 (Mic7113_1322) | - | 1514036..1514590 (-) | 555 | WP_015181367.1 | pentapeptide repeat-containing protein | - |
| MIC7113_RS06430 (Mic7113_1323) | - | 1515020..1516585 (+) | 1566 | WP_015181368.1 | SagB/ThcOx family dehydrogenase | - |
| MIC7113_RS06435 (Mic7113_1324) | pilH | 1516733..1517098 (+) | 366 | WP_015181369.1 | response regulator transcription factor | Machinery gene |
| MIC7113_RS06440 (Mic7113_1325) | - | 1517361..1518128 (-) | 768 | WP_155897949.1 | hypothetical protein | - |
| MIC7113_RS38570 (Mic7113_1326) | - | 1518116..1518241 (-) | 126 | WP_015181371.1 | hypothetical protein | - |
| MIC7113_RS06445 (Mic7113_1327) | - | 1518819..1519091 (+) | 273 | WP_015181372.1 | hypothetical protein | - |
| MIC7113_RS06450 (Mic7113_1328) | - | 1519272..1519976 (+) | 705 | WP_015181373.1 | M15 family metallopeptidase | - |
| MIC7113_RS06455 (Mic7113_1329) | - | 1520233..1520607 (+) | 375 | WP_015181374.1 | DUF3110 domain-containing protein | - |
| MIC7113_RS06460 (Mic7113_1330) | murQ | 1520713..1521645 (+) | 933 | WP_015181375.1 | N-acetylmuramic acid 6-phosphate etherase | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13457.62 Da Isoelectric Point: 5.8715
>NTDB_id=54881 MIC7113_RS06435 WP_015181369.1 1516733..1517098(+) (pilH) [Allocoleopsis franciscana PCC 7113]
MSTVLVVEDSLPQREMISELLKGYGLSVIVAGDGVEALEQIQSSSPDLVVLDIIMPRMNGYEVCRRLKANSKTQNLAVVM
CSAKKEEFDRYWGIKQGADAYISKPFHPQELVGTVKQLLRS
MSTVLVVEDSLPQREMISELLKGYGLSVIVAGDGVEALEQIQSSSPDLVVLDIIMPRMNGYEVCRRLKANSKTQNLAVVM
CSAKKEEFDRYWGIKQGADAYISKPFHPQELVGTVKQLLRS
Nucleotide
Download Length: 366 bp
>NTDB_id=54881 MIC7113_RS06435 WP_015181369.1 1516733..1517098(+) (pilH) [Allocoleopsis franciscana PCC 7113]
ATGAGTACAGTCCTGGTGGTAGAAGATAGTCTTCCACAAAGAGAAATGATCTCAGAACTGCTGAAAGGGTATGGACTGAG
TGTCATTGTGGCAGGTGATGGCGTCGAAGCCCTAGAGCAAATTCAATCGTCTTCTCCCGATCTCGTGGTTCTAGACATCA
TCATGCCCCGGATGAATGGCTATGAAGTCTGCCGTCGGCTCAAAGCCAACTCTAAAACCCAAAACTTGGCAGTGGTTATG
TGTTCAGCAAAGAAAGAAGAATTTGACCGCTACTGGGGTATAAAGCAAGGTGCTGATGCTTATATTTCCAAGCCTTTCCA
CCCTCAAGAGCTAGTTGGTACCGTTAAGCAGCTTCTGCGAAGTTAA
ATGAGTACAGTCCTGGTGGTAGAAGATAGTCTTCCACAAAGAGAAATGATCTCAGAACTGCTGAAAGGGTATGGACTGAG
TGTCATTGTGGCAGGTGATGGCGTCGAAGCCCTAGAGCAAATTCAATCGTCTTCTCCCGATCTCGTGGTTCTAGACATCA
TCATGCCCCGGATGAATGGCTATGAAGTCTGCCGTCGGCTCAAAGCCAACTCTAAAACCCAAAACTTGGCAGTGGTTATG
TGTTCAGCAAAGAAAGAAGAATTTGACCGCTACTGGGGTATAAAGCAAGGTGCTGATGCTTATATTTCCAAGCCTTTCCA
CCCTCAAGAGCTAGTTGGTACCGTTAAGCAGCTTCTGCGAAGTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
69.421 |
100 |
0.694 |
| pilG | Acinetobacter baumannii strain A118 |
39.831 |
97.521 |
0.388 |
| micA | Streptococcus pneumoniae Cp1015 |
39.167 |
99.174 |
0.388 |
| vicR | Streptococcus mutans UA159 |
39.167 |
99.174 |
0.388 |