Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | MIC7113_RS06095 | Genome accession | NC_019738 |
| Coordinates | 1439389..1439754 (+) | Length | 121 a.a. |
| NCBI ID | WP_015181305.1 | Uniprot ID | K9W9U8 |
| Organism | Allocoleopsis franciscana PCC 7113 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
||
Genomic Context
Location: 1434389..1444754
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| MIC7113_RS38560 | - | 1435327..1435458 (+) | 132 | WP_256374796.1 | hypothetical protein | - |
| MIC7113_RS06080 (Mic7113_1252) | - | 1435508..1435954 (+) | 447 | WP_015181301.1 | tellurite resistance TerB family protein | - |
| MIC7113_RS06085 (Mic7113_1253) | egtD | 1436064..1437113 (-) | 1050 | WP_015181302.1 | L-histidine N(alpha)-methyltransferase | - |
| MIC7113_RS38565 (Mic7113_1254) | - | 1437161..1437295 (-) | 135 | WP_015181303.1 | hypothetical protein | - |
| MIC7113_RS06090 (Mic7113_1255) | - | 1438026..1439225 (+) | 1200 | WP_015181304.1 | response regulator | - |
| MIC7113_RS06095 (Mic7113_1256) | pilH | 1439389..1439754 (+) | 366 | WP_015181305.1 | response regulator transcription factor | Machinery gene |
| MIC7113_RS06100 (Mic7113_1257) | - | 1439864..1440433 (+) | 570 | WP_015181306.1 | chemotaxis protein CheW | - |
| MIC7113_RS06105 (Mic7113_1258) | - | 1440728..1443631 (+) | 2904 | WP_015181307.1 | methyl-accepting chemotaxis protein | - |
Sequence
Protein
Download Length: 121 a.a. Molecular weight: 13278.35 Da Isoelectric Point: 5.1951
>NTDB_id=54880 MIC7113_RS06095 WP_015181305.1 1439389..1439754(+) (pilH) [Allocoleopsis franciscana PCC 7113]
MTTALVVEDSRTDMQVIISCLQQGGLNVLTADSGEEALSKISSHQPDVIVLDVVLPGRSGYEICRDLKAEAKTRTIPVII
CSTKSGEMDKFWGMKQGADAYLAKPVDQEELVRTVKQLIKR
MTTALVVEDSRTDMQVIISCLQQGGLNVLTADSGEEALSKISSHQPDVIVLDVVLPGRSGYEICRDLKAEAKTRTIPVII
CSTKSGEMDKFWGMKQGADAYLAKPVDQEELVRTVKQLIKR
Nucleotide
Download Length: 366 bp
>NTDB_id=54880 MIC7113_RS06095 WP_015181305.1 1439389..1439754(+) (pilH) [Allocoleopsis franciscana PCC 7113]
ATGACTACTGCTCTAGTTGTTGAAGATTCCAGAACTGATATGCAAGTGATCATTAGCTGTTTGCAACAAGGAGGCTTAAA
TGTCCTGACGGCTGACAGTGGTGAAGAAGCTCTAAGCAAAATTAGTAGCCATCAACCAGATGTCATCGTTCTGGATGTTG
TCCTACCCGGACGCAGTGGATATGAAATCTGTCGCGACCTCAAAGCTGAAGCCAAAACCCGCACCATTCCAGTAATTATC
TGTTCAACTAAATCAGGCGAAATGGATAAATTCTGGGGCATGAAACAGGGAGCAGATGCTTACCTTGCCAAACCAGTTGA
CCAAGAGGAATTAGTCCGTACCGTGAAACAGCTCATCAAACGATAA
ATGACTACTGCTCTAGTTGTTGAAGATTCCAGAACTGATATGCAAGTGATCATTAGCTGTTTGCAACAAGGAGGCTTAAA
TGTCCTGACGGCTGACAGTGGTGAAGAAGCTCTAAGCAAAATTAGTAGCCATCAACCAGATGTCATCGTTCTGGATGTTG
TCCTACCCGGACGCAGTGGATATGAAATCTGTCGCGACCTCAAAGCTGAAGCCAAAACCCGCACCATTCCAGTAATTATC
TGTTCAACTAAATCAGGCGAAATGGATAAATTCTGGGGCATGAAACAGGGAGCAGATGCTTACCTTGCCAAACCAGTTGA
CCAAGAGGAATTAGTCCGTACCGTGAAACAGCTCATCAAACGATAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
49.167 |
99.174 |
0.488 |
| micA | Streptococcus pneumoniae Cp1015 |
36.364 |
100 |
0.364 |
| vicR | Streptococcus mutans UA159 |
36.364 |
100 |
0.364 |
| ciaR | Streptococcus mutans UA159 |
36.364 |
100 |
0.364 |