Detailed information
Bioinformatically predicted
Overview
| Name | pilH | Type | Machinery gene |
| Locus tag | OSCIL6304_RS11745 | Genome accession | NC_019693 |
| Coordinates | 2935138..2935497 (-) | Length | 119 a.a. |
| NCBI ID | WP_015148650.1 | Uniprot ID | K9THX8 |
| Organism | Oscillatoria acuminata PCC 6304 | ||
| Function | type IV pilus biogenesis and function (predicted from homology) DNA binding and uptake |
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Genomic Context
Location: 2930138..2940497
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| OSCIL6304_RS32375 (Oscil6304_2376) | - | 2931926..2932180 (+) | 255 | WP_015148646.1 | hypothetical protein | - |
| OSCIL6304_RS32380 (Oscil6304_2377) | - | 2932517..2932687 (+) | 171 | WP_015148647.1 | DUF4177 domain-containing protein | - |
| OSCIL6304_RS11735 (Oscil6304_2378) | - | 2932684..2933343 (+) | 660 | WP_015148648.1 | hypothetical protein | - |
| OSCIL6304_RS11740 (Oscil6304_2379) | - | 2934001..2934744 (+) | 744 | WP_015148649.1 | PEP-CTERM sorting domain-containing protein | - |
| OSCIL6304_RS11745 (Oscil6304_2380) | pilH | 2935138..2935497 (-) | 360 | WP_015148650.1 | response regulator | Machinery gene |
| OSCIL6304_RS11750 (Oscil6304_2381) | thiC | 2936258..2937631 (+) | 1374 | WP_015148651.1 | phosphomethylpyrimidine synthase | - |
| OSCIL6304_RS11755 (Oscil6304_2382) | - | 2937702..2938355 (+) | 654 | WP_015148652.1 | hypothetical protein | - |
| OSCIL6304_RS11760 (Oscil6304_2383) | - | 2938365..2939837 (-) | 1473 | WP_015148653.1 | N-6 DNA methylase | - |
Sequence
Protein
Download Length: 119 a.a. Molecular weight: 13287.58 Da Isoelectric Point: 4.7482
>NTDB_id=54783 OSCIL6304_RS11745 WP_015148650.1 2935138..2935497(-) (pilH) [Oscillatoria acuminata PCC 6304]
MSKILVVDDVPSELEMIGRILKKAGMEVVVATNGEEAIARIQETAPDLVILDVVMPRMNGFEVIRELRGDRKTSKLPVVF
CSQKNTEIDKTWGMDLGADAYITKPVDPQQLVHIVERLL
MSKILVVDDVPSELEMIGRILKKAGMEVVVATNGEEAIARIQETAPDLVILDVVMPRMNGFEVIRELRGDRKTSKLPVVF
CSQKNTEIDKTWGMDLGADAYITKPVDPQQLVHIVERLL
Nucleotide
Download Length: 360 bp
>NTDB_id=54783 OSCIL6304_RS11745 WP_015148650.1 2935138..2935497(-) (pilH) [Oscillatoria acuminata PCC 6304]
ATGAGCAAAATCTTAGTGGTAGATGATGTGCCGAGTGAACTGGAGATGATTGGCCGGATTTTGAAAAAAGCCGGGATGGA
GGTGGTGGTGGCAACTAATGGCGAGGAGGCGATCGCCCGGATTCAGGAGACGGCACCGGATCTGGTGATTCTAGATGTGG
TGATGCCTCGGATGAATGGATTTGAGGTGATCCGAGAGTTACGCGGCGATCGCAAGACATCCAAGTTACCTGTGGTGTTT
TGCAGTCAGAAAAATACGGAGATTGATAAGACTTGGGGCATGGATTTGGGAGCTGATGCCTATATTACCAAACCCGTTGA
CCCTCAGCAATTGGTTCATATTGTTGAACGGTTATTGTGA
ATGAGCAAAATCTTAGTGGTAGATGATGTGCCGAGTGAACTGGAGATGATTGGCCGGATTTTGAAAAAAGCCGGGATGGA
GGTGGTGGTGGCAACTAATGGCGAGGAGGCGATCGCCCGGATTCAGGAGACGGCACCGGATCTGGTGATTCTAGATGTGG
TGATGCCTCGGATGAATGGATTTGAGGTGATCCGAGAGTTACGCGGCGATCGCAAGACATCCAAGTTACCTGTGGTGTTT
TGCAGTCAGAAAAATACGGAGATTGATAAGACTTGGGGCATGGATTTGGGAGCTGATGCCTATATTACCAAACCCGTTGA
CCCTCAGCAATTGGTTCATATTGTTGAACGGTTATTGTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| pilH | Synechocystis sp. PCC 6803 |
50.42 |
100 |
0.504 |
| micA | Streptococcus pneumoniae Cp1015 |
42.017 |
100 |
0.42 |
| scnR | Streptococcus mutans UA159 |
42.342 |
93.277 |
0.395 |
| vicR | Streptococcus mutans UA159 |
40.179 |
94.118 |
0.378 |