Detailed information    

insolico Bioinformatically predicted

Overview

Name   pilG   Type   Regulator
Locus tag   J2887_RS00175 Genome accession   NZ_CP071785
Coordinates   44560..44952 (-) Length   130 a.a.
NCBI ID   WP_227173238.1    Uniprot ID   -
Organism   Marinobacter sp. CA1     
Function   regulation of type IV pilus assembly (predicted from homology)   
Competence regulation

Genomic Context

Location: 39560..49952
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  J2887_RS00155 (J2887_00155) - 40515..41414 (-) 900 WP_227173231.1 CheR family methyltransferase -
  J2887_RS00160 (J2887_00160) - 41442..43517 (-) 2076 WP_227173233.1 methyl-accepting chemotaxis protein -
  J2887_RS00165 (J2887_00165) - 43597..44142 (-) 546 WP_227173234.1 chemotaxis protein CheW -
  J2887_RS00170 (J2887_00170) pilH 44162..44524 (-) 363 WP_227173236.1 twitching motility response regulator PilH -
  J2887_RS00175 (J2887_00175) pilG 44560..44952 (-) 393 WP_227173238.1 twitching motility response regulator PilG Regulator
  J2887_RS00180 (J2887_00180) gshB 45242..46207 (+) 966 WP_227173239.1 glutathione synthase -
  J2887_RS00185 (J2887_00185) - 46255..47112 (+) 858 WP_227173240.1 energy transducer TonB -
  J2887_RS00190 (J2887_00190) - 47109..47678 (+) 570 WP_227173241.1 YqgE/AlgH family protein -
  J2887_RS00195 (J2887_00195) ruvX 47671..48114 (+) 444 WP_227173243.1 Holliday junction resolvase RuvX -
  J2887_RS00200 (J2887_00200) pyrR 48159..48662 (+) 504 WP_227173245.1 bifunctional pyr operon transcriptional regulator/uracil phosphoribosyltransferase PyrR -
  J2887_RS00205 (J2887_00205) - 48735..49745 (+) 1011 WP_227173247.1 aspartate carbamoyltransferase catalytic subunit -

Sequence

Protein


Download         Length: 130 a.a.        Molecular weight: 14579.86 Da        Isoelectric Point: 5.2241

>NTDB_id=547746 J2887_RS00175 WP_227173238.1 44560..44952(-) (pilG) [Marinobacter sp. CA1]
MDDNFENLKIMVIDDSKTIRRTAETLLKKVGCEVITATDGFDALAKIADSQPDIIFVDIMMPRLDGYQTCALIKNNSAFK
KTPVIMLSSKDGLFDKAKGRIVGSDQYLTKPFSKDELLNTIRQYVPQAEQ

Nucleotide


Download         Length: 393 bp        

>NTDB_id=547746 J2887_RS00175 WP_227173238.1 44560..44952(-) (pilG) [Marinobacter sp. CA1]
ATGGATGACAACTTCGAGAATCTGAAGATCATGGTGATTGACGACAGCAAAACGATTCGTCGAACCGCCGAAACACTGCT
CAAGAAGGTGGGCTGTGAAGTCATCACGGCTACCGACGGCTTTGACGCTCTCGCCAAGATCGCCGATTCCCAACCGGACA
TCATCTTTGTTGATATCATGATGCCCCGGCTGGATGGTTACCAGACCTGCGCCCTGATCAAGAACAACTCTGCCTTCAAG
AAAACGCCGGTGATCATGCTCTCCAGCAAGGACGGCCTGTTCGACAAGGCCAAAGGTCGCATTGTCGGGTCGGATCAGTA
CCTGACCAAGCCGTTCAGCAAAGACGAACTGCTCAATACCATCCGTCAGTACGTTCCCCAGGCGGAACAGTGA

Domains

Predicted by InterproScan.

Response regulator receiver domain (Response_reg)

(10-121)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  pilG Acinetobacter baumannii strain A118

78.4

96.154

0.754
  vicR Streptococcus mutans UA159

41.803

93.846

0.392
  pilH Synechocystis sp. PCC 6803

40.517

89.231

0.362
  micA Streptococcus pneumoniae Cp1015

43.119

83.846

0.362