Detailed information
Bioinformatically predicted
Overview
| Name | comW | Type | Regulator |
| Locus tag | H020_RS0100125 | Genome accession | NZ_AKVY01000001 |
| Coordinates | 22365..22601 (+) | Length | 78 a.a. |
| NCBI ID | WP_000939545.1 | Uniprot ID | A0A0H2ZMA7 |
| Organism | Streptococcus pneumoniae TIGR4 | ||
| Function | stabilization and activation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 17365..27601
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| H020_RS12200 | - | 20422..21267 (+) | 846 | Protein_14 | IS630-like element IS630-Spn1 family transposase | - |
| H020_RS12205 | - | 21302..22099 (-) | 798 | Protein_15 | transposase | - |
| H020_RS0100125 | comW | 22365..22601 (+) | 237 | WP_000939545.1 | sigma(X)-activator ComW | Regulator |
| H020_RS0100130 | - | 22832..24118 (+) | 1287 | WP_000205044.1 | adenylosuccinate synthase | - |
| H020_RS0100135 | tadA | 24319..24786 (+) | 468 | WP_000291875.1 | tRNA adenosine(34) deaminase TadA | - |
| H020_RS0100140 | - | 24973..25416 (+) | 444 | WP_000701992.1 | dUTP diphosphatase | - |
| H020_RS0100145 | - | 25418..25933 (+) | 516 | WP_000691236.1 | histidine phosphatase family protein | - |
| H020_RS0100150 | radA | 25947..27308 (+) | 1362 | WP_074017595.1 | DNA repair protein RadA | Machinery gene |
Sequence
Protein
Download Length: 78 a.a. Molecular weight: 9658.13 Da Isoelectric Point: 6.7051
>NTDB_id=54638 H020_RS0100125 WP_000939545.1 22365..22601(+) (comW) [Streptococcus pneumoniae TIGR4]
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
MLQKIYEQMANFYDSIEEEYGPTFGDNFDWEHVHFKFLIYYLVRYGIGCRKDFIVYHYRVAYRLYLEKLVMNRGFISC
Nucleotide
Download Length: 237 bp
>NTDB_id=54638 H020_RS0100125 WP_000939545.1 22365..22601(+) (comW) [Streptococcus pneumoniae TIGR4]
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
ATGTTACAAAAAATTTATGAGCAGATGGCTAATTTCTATGATAGTATTGAAGAAGAGTATGGTCCTACATTTGGTGATAA
TTTTGACTGGGAACATGTTCATTTTAAATTTTTAATTTATTATTTAGTGAGATATGGCATTGGTTGTCGTAAGGATTTTA
TTGTTTACCATTATCGTGTTGCTTATCGTTTGTATCTTGAAAAATTGGTAATGAATCGGGGTTTTATTTCTTGTTGA
Domains
No domain identified.
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| comW | Streptococcus pneumoniae Rx1 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae D39 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae R6 |
100 |
100 |
1 |
| comW | Streptococcus pneumoniae TIGR4 |
100 |
100 |
1 |
| comW | Streptococcus mitis SK321 |
75.641 |
100 |
0.756 |
| comW | Streptococcus mitis NCTC 12261 |
75.325 |
98.718 |
0.744 |