Detailed information NTG0544733

Bioinformatically predicted

Overview

• Name: dprA
• Type: Machinery gene
• Locus tag: J0J33_RS07540
• Genome accession: NZ_CP071295
• Coordinates: 1542929..1543798 (-)
• Length: 289 a.a.
• NCBI ID: WP_019293953.1
• Uniprot ID: A0AAJ2IZH0
• Organism: Lactococcus sp. LG1267
• Function: ssDNA binding; loading RecA onto ssDNA (predicted from homology) DNA processing

Genomic Context

Location: 1537929..1548798

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
J0J33_RS07525 (J0J33_07525)	-	1538903..1539124 (+)	222	WP_019292266.1	hypothetical protein	-
J0J33_RS07530 (J0J33_07530)	trmFO	1539198..1540541 (-)	1344	WP_046401193.1	methylenetetrahydrofolate--tRNA-(uracil(54)- C(5))-methyltransferase (FADH(2)-oxidizing) TrmFO	-
J0J33_RS07535 (J0J33_07535)	topA	1540590..1542740 (-)	2151	WP_206887365.1	type I DNA topoisomerase	-
J0J33_RS07540 (J0J33_07540)	dprA	1542929..1543798 (-)	870	WP_019293953.1	DNA-processing protein DprA	Machinery gene
J0J33_RS07545 (J0J33_07545)	budA	1543885..1544583 (-)	699	WP_046401190.1	acetolactate decarboxylase	-
J0J33_RS07550 (J0J33_07550)	-	1544728..1546452 (-)	1725	WP_206887366.1	ABC transporter permease/substrate binding protein	-
J0J33_RS07555 (J0J33_07555)	-	1546445..1547647 (-)	1203	WP_014024780.1	glycine betaine/L-proline ABC transporter ATP-binding protein	-
J0J33_RS07560 (J0J33_07560)	-	1547852..1548472 (-)	621	WP_019291676.1	GntR family transcriptional regulator	-

Sequence

Protein

• Length: 289 a.a.
• Molecular weight: 32871.09 Da
• Isoelectric Point: 9.9003

>NTDB_id=544733 J0J33_RS07540 WP_019293953.1 1542929..1543798(-) (dprA) [Lactococcus sp. LG1267]
MIKNFEILRLKKAGMSNLGILKLIDYQRRHEAKLTLRQLARIAEVKTVPNFIESYKSQDVKRLREQYKIFPSFSILDDIY
PEWLRETYNPPALLFYRGDLKLLSLPKLGFVGSREMSKEAPRIIHKLIEELKQNFVIVSGLARGVDTSSHVAAVKQKTPT
IAVIGNGLDISYPKENRKLQEYLAAHELVLSEYLVGEQPLKFHFPERNRIIAGLSRGVVVVEAKQRSGSLITSRYALEGN
REVFAVPGDILNRNASGCNQLIQQGAAKLVTHGQDILDEFYLYEGNFFP

Nucleotide

• Length: 870 bp

>NTDB_id=544733 J0J33_RS07540 WP_019293953.1 1542929..1543798(-) (dprA) [Lactococcus sp. LG1267]
ATGATTAAAAACTTTGAAATATTACGTTTAAAAAAAGCAGGAATGTCTAATTTAGGGATTTTGAAACTGATTGATTATCA
GAGGAGGCATGAAGCAAAACTCACTCTACGCCAGTTAGCGCGGATTGCAGAGGTCAAAACTGTCCCTAATTTTATTGAGA
GTTATAAGAGTCAAGATGTGAAACGACTTCGTGAGCAATACAAAATTTTCCCCTCCTTTTCCATTTTAGATGACATTTAT
CCCGAATGGCTGAGAGAAACATATAATCCGCCTGCCCTCCTTTTTTACCGAGGAGATCTTAAATTGCTTAGTCTTCCTAA
ACTTGGGTTTGTAGGTAGTCGTGAAATGTCTAAGGAAGCACCAAGAATAATCCATAAGCTTATTGAGGAATTAAAGCAAA
ACTTTGTTATTGTGAGCGGATTAGCACGCGGTGTTGACACCTCAAGCCATGTAGCAGCTGTAAAACAAAAAACTCCAACC
ATTGCTGTCATTGGTAATGGGTTAGATATTAGTTATCCAAAAGAAAATCGTAAATTACAAGAATACTTAGCAGCACATGA
ATTAGTTTTATCAGAATACCTTGTAGGAGAGCAACCCCTCAAGTTTCATTTCCCAGAGAGAAATAGAATCATTGCTGGTC
TTTCCCGTGGTGTTGTTGTTGTGGAAGCAAAACAACGTAGTGGTAGCCTTATCACAAGTCGTTATGCTTTAGAGGGTAAT
AGAGAAGTTTTTGCTGTACCTGGAGATATTTTGAATAGAAATGCTTCTGGCTGTAATCAATTAATCCAACAAGGTGCAGC
CAAGCTTGTCACTCATGGACAAGATATTTTAGATGAATTTTATTTATATGAAGGGAATTTCTTTCCTTAA

Domains

Predicted by InterproScan.

• DNA recombination-mediator protein A (DNA_processg_A) (75-271)

• DNA processing protein A sterile alpha motif domain (SAM_DprA) (2-63)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
dprA	Lactococcus lactis subsp. cremoris KW2	63.958	97.924	0.626
dprA	Streptococcus mutans UA159	55.556	96.54	0.536
dprA/cilB/dalA	Streptococcus pneumoniae Rx1	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae D39	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae R6	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus pneumoniae TIGR4	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis SK321	53.763	96.54	0.519
dprA/cilB/dalA	Streptococcus mitis NCTC 12261	53.047	96.54	0.512
dprA	Latilactobacillus sakei subsp. sakei 23K	39.273	95.156	0.374