Detailed information    

insolico Bioinformatically predicted

Overview

Name   prx   Type   Regulator
Locus tag   SCAZ3_RS02885 Genome accession   NZ_AIDX01000001
Coordinates   630319..630501 (-) Length   60 a.a.
NCBI ID   WP_003045285.1    Uniprot ID   -
Organism   Streptococcus canis FSL Z3-227     
Function   Inhibit ComR activation (predicted from homology)   
Competence regulation

Genomic Context

Location: 625319..635501
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  SCAZ3_RS02870 (SCAZ3_09895) - 626329..627186 (-) 858 WP_003045277.1 5'-nucleotidase, lipoprotein e(P4) family -
  SCAZ3_RS02875 (SCAZ3_09900) gap 627369..628379 (-) 1011 WP_003045279.1 type I glyceraldehyde-3-phosphate dehydrogenase -
  SCAZ3_RS02880 (SCAZ3_09905) - 628825..630144 (-) 1320 WP_003045281.1 ISLre2 family transposase -
  SCAZ3_RS02885 (SCAZ3_09910) prx 630319..630501 (-) 183 WP_003045285.1 hypothetical protein Regulator
  SCAZ3_RS02890 (SCAZ3_09915) - 630743..630988 (-) 246 WP_003045287.1 hypothetical protein -
  SCAZ3_RS02895 (SCAZ3_09920) - 631084..631881 (-) 798 WP_003045290.1 ParA family protein -
  SCAZ3_RS12170 - 632178..632357 (-) 180 Protein_579 helix-turn-helix domain-containing protein -
  SCAZ3_RS02905 (SCAZ3_09930) - 632383..634026 (-) 1644 WP_241428836.1 helical hairpin domain-containing protein -
  SCAZ3_RS02910 (SCAZ3_09935) - 634077..634517 (-) 441 WP_003045296.1 plasmid mobilization protein -
  SCAZ3_RS02915 (SCAZ3_09940) - 634798..635091 (-) 294 WP_003045300.1 hypothetical protein -

Sequence

Protein


Download         Length: 60 a.a.        Molecular weight: 6836.79 Da        Isoelectric Point: 3.9488

>NTDB_id=54315 SCAZ3_RS02885 WP_003045285.1 630319..630501(-) (prx) [Streptococcus canis FSL Z3-227]
MFYRYELEEMINTGRLPGNTVQVVRKNGLIFDVVLEGEPIKDNEVISVESIADVLNELPE

Nucleotide


Download         Length: 183 bp        

>NTDB_id=54315 SCAZ3_RS02885 WP_003045285.1 630319..630501(-) (prx) [Streptococcus canis FSL Z3-227]
ATGTTTTATAGATATGAGTTAGAAGAGATGATAAACACAGGAAGGTTACCTGGGAATACTGTGCAAGTCGTTAGGAAGAA
TGGCTTGATTTTTGATGTTGTCCTGGAGGGCGAGCCAATCAAAGATAACGAGGTTATATCAGTTGAAAGCATAGCAGACG
TATTAAATGAACTACCAGAATAA

Domains


No domain identified.



Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  prx Streptococcus pyogenes MGAS8232

44.444

90

0.4
  prx Streptococcus pyogenes MGAS315

44.444

90

0.4
  prx Streptococcus pyogenes MGAS315

43.396

88.333

0.383
  prx Streptococcus pyogenes MGAS315

43.396

88.333

0.383

Multiple sequence alignment