Detailed information NTG0054300

Bioinformatically predicted

Overview

• Name: vicR
• Type: Regulator
• Locus tag: SDSE_RS13505
• Genome accession: NC_019042
• Coordinates: 561611..562318 (+)
• Length: 235 a.a.
• NCBI ID: WP_003055001.1
• Uniprot ID: -
• Organism: Streptococcus dysgalactiae subsp. equisimilis AC-2713
• Function: repress comCDE expression; repress comX expression (predicted from homology) Competence regulation

Genomic Context

Location: 556611..567318

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDSE_RS13480 (S_dysgal_equisimilis_AC2713_621)	-	557325..558749 (+)	1425	WP_015057406.1	glycoside hydrolase family 1 protein	-
SDSE_RS13485 (S_dysgal_equisimilis_AC2713_622)	-	558848..559663 (-)	816	WP_015057407.1	TIGR03943 family protein	-
SDSE_RS13490 (S_dysgal_equisimilis_AC2713_623)	-	559663..560565 (-)	903	WP_015057408.1	permease	-
SDSE_RS21760 (S_dysgal_equisimilis_AC2713_624)	-	560712..560867 (-)	156	WP_015057409.1	SPJ_0845 family protein	-
SDSE_RS13500 (S_dysgal_equisimilis_AC2713_625)	-	561042..561524 (+)	483	WP_015057410.1	cupin domain-containing protein	-
SDSE_RS13505 (S_dysgal_equisimilis_AC2713_626)	vicR	561611..562318 (+)	708	WP_003055001.1	response regulator transcription factor	Regulator
SDSE_RS13510 (S_dysgal_equisimilis_AC2713_627)	-	562319..563647 (+)	1329	WP_015057411.1	ATP-binding protein	-
SDSE_RS13515 (S_dysgal_equisimilis_AC2713_628)	-	563814..564689 (+)	876	WP_014612110.1	substrate-binding domain-containing protein	-
SDSE_RS13520 (S_dysgal_equisimilis_AC2713_629)	pstC	564807..565670 (+)	864	WP_012766699.1	phosphate ABC transporter permease subunit PstC	-
SDSE_RS13525 (S_dysgal_equisimilis_AC2713_630)	pstA	565663..566478 (+)	816	WP_015057412.1	phosphate ABC transporter permease PstA	-
SDSE_RS13530 (S_dysgal_equisimilis_AC2713_631)	pstB	566480..567232 (+)	753	WP_003055005.1	phosphate ABC transporter ATP-binding protein PstB	-

Sequence

Protein

• Length: 235 a.a.
• Molecular weight: 27491.70 Da
• Isoelectric Point: 5.4461

>NTDB_id=54300 SDSE_RS13505 WP_003055001.1 561611..562318(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MTKQILLVDDEEHILRLLDYHLGKEGFSTQLVTDGRKALTLAETEPFDFILLDIMLPQLDGIEVCKRLRAKGIKTPIMMV
SAKSDEFDKVLALELGADDYLTKPFSPRELLARVKAILRRTSKEQQEDDTDDFRDDYRVFGALTVYPDRHEVYKADHLLS
LTPKEFELLLYLMKHPNMTLTRERLLERIWGYDFGQETRLVDVHIGKLRDKIEDNPKDPQFIQTIRGYGYKFKEL

Nucleotide

• Length: 708 bp

>NTDB_id=54300 SDSE_RS13505 WP_003055001.1 561611..562318(+) (vicR) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGACAAAACAAATCTTATTAGTGGATGATGAAGAACACATTTTGAGGCTACTGGATTATCATCTCGGTAAAGAAGGGTT
TTCCACACAATTGGTAACAGATGGCCGAAAAGCATTGACATTGGCAGAAACAGAGCCTTTTGACTTTATCCTACTGGATA
TTATGTTGCCTCAGTTAGACGGCATAGAAGTGTGTAAGCGACTGAGAGCTAAAGGAATAAAAACTCCGATTATGATGGTT
TCTGCTAAAAGTGATGAATTTGATAAGGTTTTGGCCTTGGAATTAGGAGCTGATGACTACCTGACTAAGCCTTTTAGCCC
TAGAGAATTGCTGGCGCGTGTCAAGGCTATTTTACGTCGAACCAGTAAAGAGCAGCAAGAAGATGACACAGATGATTTCA
GGGATGATTATCGGGTATTTGGGGCCCTGACCGTCTATCCAGACCGGCATGAGGTTTATAAGGCAGATCATTTATTGAGC
CTTACCCCAAAGGAATTTGAACTCTTGCTCTATCTTATGAAACATCCCAACATGACATTAACTAGGGAACGTTTACTTGA
ACGGATTTGGGGATATGATTTTGGACAAGAAACCCGTTTAGTGGATGTTCATATTGGCAAATTGAGAGATAAGATAGAGG
ATAATCCTAAAGACCCTCAATTTATTCAAACGATTAGAGGCTATGGGTATAAGTTTAAGGAGTTATAG

Domains

Predicted by InterproScan.

• Transcriptional regulatory protein, C terminal (Trans_reg_C) (159-232)

• Response regulator receiver domain (Response_reg) (5-115)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
vicR	Streptococcus mutans UA159	49.145	99.574	0.489
micA	Streptococcus pneumoniae Cp1015	47.619	98.298	0.468
covR	Lactococcus lactis subsp. lactis strain DGCC12653	41.772	100	0.421
covR	Streptococcus salivarius strain HSISS4	40.506	100	0.409