Detailed information NTG0054290

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: SDSE_RS12375
• Genome accession: NC_019042
• Coordinates: 337280..338350 (+)
• Length: 356 a.a.
• NCBI ID: WP_003057822.1
• Uniprot ID: A0AAE9U680
• Organism: Streptococcus dysgalactiae subsp. equisimilis AC-2713
• Function: internalize XIP (predicted from homology) Competence regulation

Related MGE

Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.

Gene-MGE association summary

MGE type	MGE coordinates	Gene coordinates	Relative position	Distance (bp)
IS/Tn	339294..340280	337280..338350	flank	944

Gene organization within MGE regions

Location: 337280..340280

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SDSE_RS12375 (S_dysgal_equisimilis_AC2713_393)	amiE	337280..338350 (+)	1071	WP_003057822.1	ABC transporter ATP-binding protein	Regulator
SDSE_RS12380 (S_dysgal_equisimilis_AC2713_394)	amiF	338343..339266 (+)	924	WP_003057816.1	ABC transporter ATP-binding protein	Regulator
SDSE_RS12385 (S_dysgal_equisimilis_AC2713_395)	-	339294..340280 (-)	987	WP_015057328.1	IS30-like element IS1239 family transposase	-

Sequence

Protein

• Length: 356 a.a.
• Molecular weight: 39607.62 Da
• Isoelectric Point: 5.6648

>NTDB_id=54290 SDSE_RS12375 WP_003057822.1 337280..338350(+) (amiE) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
MTKENNVILTAKDVVVEFDVRDRVLTAIRNVSLELIEGEVLAFVGESGSGKSVLTKTFTGMLESNGRIANGSIVYRGQEL
TELKTNKEWAKIRGSKIATIFQDPMTSLSPIKTIGSQITEVIIKHQKVSHSKAKELALDYMNKVGIPNATKRFDDYPFEY
SGGMRQRIVIAIALACRPDILICDEPTTALDVTIQAQIIELLKSLQKEYHFTIIFITHDLGVVASIADKVAVMYAGEIVE
FGTVEEIFYDPRHPYTWSLLSSLPQLANESGELYSIPGTPPSLYSPIVGDAFALRSEYAMVLDFEETPPAISVSDTHWAK
TWLLHPEAPKVQKPAVIQDLHQKILKKMSRQEEGNV

Nucleotide

• Length: 1071 bp

>NTDB_id=54290 SDSE_RS12375 WP_003057822.1 337280..338350(+) (amiE) [Streptococcus dysgalactiae subsp. equisimilis AC-2713]
ATGACAAAAGAAAATAATGTAATCTTAACTGCCAAAGATGTGGTGGTGGAATTCGACGTGCGCGACCGTGTTTTAACGGC
TATTCGGAACGTTTCTTTAGAGCTTATTGAAGGAGAGGTCCTTGCTTTTGTAGGAGAATCAGGTTCAGGTAAATCTGTTT
TAACCAAGACCTTTACAGGGATGTTGGAGTCTAATGGACGTATTGCCAACGGCTCGATTGTCTACCGTGGTCAAGAATTA
ACAGAACTAAAAACGAATAAGGAATGGGCTAAGATTCGTGGTTCAAAAATTGCTACTATTTTCCAAGATCCGATGACCAG
TCTTAGTCCTATCAAAACCATTGGTAGCCAGATTACAGAGGTCATTATCAAGCATCAAAAAGTTAGCCATTCTAAAGCCA
AAGAATTGGCGCTTGATTATATGAATAAAGTTGGTATTCCAAATGCGACAAAGCGTTTTGACGACTATCCATTTGAATAT
TCAGGTGGTATGCGCCAACGTATTGTTATTGCCATTGCATTAGCTTGCCGCCCAGATATCCTGATTTGTGATGAGCCCAC
AACAGCTCTCGACGTTACAATACAAGCCCAAATTATTGAATTGTTGAAATCACTTCAAAAAGAGTACCATTTTACGATTA
TTTTTATCACTCATGATTTAGGTGTTGTGGCAAGTATTGCTGATAAGGTTGCTGTCATGTATGCTGGTGAAATTGTCGAG
TTTGGAACTGTTGAAGAAATTTTCTATGATCCACGTCATCCTTACACATGGAGTTTATTGTCAAGCTTACCGCAATTAGC
CAATGAGTCAGGAGAACTTTACTCAATTCCAGGGACACCACCGTCACTTTATTCGCCAATCGTTGGAGATGCATTTGCAC
TTCGCTCAGAATATGCTATGGTTTTGGATTTCGAAGAGACACCACCTGCTATTAGTGTATCTGATACTCATTGGGCAAAA
ACATGGCTTTTGCACCCAGAGGCGCCAAAAGTTCAGAAACCGGCAGTTATTCAAGATTTACATCAAAAAATCTTGAAAAA
AATGTCACGACAGGAGGAAGGAAATGTCTGA

Domains

Predicted by InterproScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (239-299)

• ABC transporter (ABC_tran) (29-187)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	77.5	100	0.784
amiE	Streptococcus thermophilus LMG 18311	76.389	100	0.772
amiE	Streptococcus thermophilus LMD-9	76.389	100	0.772
oppD	Streptococcus mutans UA159	57.27	94.663	0.542