Detailed information NTG0541748

Bioinformatically predicted

Overview

• Name: comEA
• Type: Machinery gene
• Locus tag: JYG31_RS13810
• Genome accession: NZ_CP070976
• Coordinates: 2671536..2672153 (-)
• Length: 205 a.a.
• NCBI ID: WP_127696752.1
• Uniprot ID: -
• Organism: Bacillus halotolerans strain MBH1
• Function: dsDNA binding to the cell surface (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2666536..2677153

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JYG31_RS13780 (JYG31_13780)	rpsT	2666839..2667105 (+)	267	WP_010335003.1	30S ribosomal protein S20	-
JYG31_RS13785 (JYG31_13785)	holA	2667120..2668163 (-)	1044	WP_095713316.1	DNA polymerase III subunit delta	-
JYG31_RS13790 (JYG31_13790)	-	2668203..2668352 (-)	150	WP_003229985.1	hypothetical protein	-
JYG31_RS13795 (JYG31_13795)	-	2668393..2668527 (+)	135	WP_010335005.1	YqzM family protein	-
JYG31_RS13800 (JYG31_13800)	comEC	2668566..2670896 (-)	2331	WP_213418750.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JYG31_RS13805 (JYG31_13805)	-	2670900..2671469 (-)	570	WP_010335007.1	ComE operon protein 2	-
JYG31_RS13810 (JYG31_13810)	comEA	2671536..2672153 (-)	618	WP_127696752.1	helix-hairpin-helix domain-containing protein	Machinery gene
JYG31_RS13815 (JYG31_13815)	comER	2672237..2673058 (+)	822	WP_095713318.1	late competence protein ComER	-
JYG31_RS13820 (JYG31_13820)	-	2673123..2673866 (-)	744	WP_024122114.1	class I SAM-dependent methyltransferase	-
JYG31_RS13825 (JYG31_13825)	rsfS	2673863..2674219 (-)	357	WP_024122115.1	ribosome silencing factor	-
JYG31_RS13830 (JYG31_13830)	yqeK	2674237..2674797 (-)	561	WP_024122116.1	bis(5'-nucleosyl)-tetraphosphatase (symmetrical) YqeK	-
JYG31_RS13835 (JYG31_13835)	-	2674787..2675356 (-)	570	WP_010335014.1	nicotinate-nucleotide adenylyltransferase	-
JYG31_RS13840 (JYG31_13840)	yhbY	2675367..2675657 (-)	291	WP_024122118.1	ribosome assembly RNA-binding protein YhbY	-
JYG31_RS13845 (JYG31_13845)	aroE	2675657..2676493 (-)	837	WP_038954228.1	shikimate dehydrogenase	-

Sequence

Protein

• Length: 205 a.a.
• Molecular weight: 22018.82 Da
• Isoelectric Point: 4.7586

>NTDB_id=541748 JYG31_RS13810 WP_127696752.1 2671536..2672153(-) (comEA) [Bacillus halotolerans strain MBH1]
MNWLNQHKTIIMSVGSAAVLIAVLCLFFFSGNNKEPVKQVVSSEKENEEVKQEATKDKAEENIVIDIKGAVKHPGVYEMH
TGDRVSQAIEKAGGIGEKADETQVNLAELLQDGTVVYIPSKGEEAAQQAAGGAVQSSTGKETLVNINTATLEDLQNISGV
GPSKAEAIIAYREENGRFQTIEDITKVSGIGEKSFEKIKSSITVK

Nucleotide

• Length: 618 bp

>NTDB_id=541748 JYG31_RS13810 WP_127696752.1 2671536..2672153(-) (comEA) [Bacillus halotolerans strain MBH1]
TTGAATTGGTTGAATCAACATAAAACGATAATCATGTCAGTTGGCTCTGCTGCTGTTCTCATTGCAGTTCTTTGCCTCTT
TTTTTTCAGCGGAAATAACAAAGAGCCTGTAAAACAAGTTGTATCTAGTGAAAAGGAAAATGAGGAGGTCAAGCAGGAAG
CAACAAAAGACAAAGCGGAAGAAAATATTGTAATCGATATAAAAGGCGCTGTTAAGCATCCCGGCGTTTATGAAATGCAT
ACGGGAGACAGAGTATCGCAGGCTATTGAGAAAGCAGGCGGCATTGGTGAAAAAGCAGATGAAACGCAAGTGAATTTGGC
GGAACTTTTACAGGACGGTACAGTGGTGTATATACCGAGTAAGGGAGAAGAGGCGGCACAGCAAGCGGCCGGCGGCGCTG
TACAAAGCAGTACGGGGAAGGAGACTTTGGTCAATATCAACACAGCAACATTAGAGGATTTACAAAACATTTCGGGAGTA
GGGCCTTCAAAAGCCGAAGCGATTATTGCGTATCGGGAAGAGAACGGGCGTTTCCAGACAATCGAAGATATCACAAAGGT
TTCGGGAATTGGCGAAAAATCTTTTGAAAAAATAAAGTCTTCCATTACAGTAAAGTGA

Domains

Predicted by InterproScan.

• Helix-hairpin-helix motif (HHH_3) (141-203)

• SLBB domain (SLBB) (64-119)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEA	Bacillus subtilis subsp. subtilis str. 168	77.184	100	0.776
comEA	Staphylococcus aureus N315	37.838	100	0.41
comEA	Staphylococcus aureus MW2	37.727	100	0.405
comEA	Latilactobacillus sakei subsp. sakei 23K	36.239	100	0.385
comEA	Streptococcus thermophilus LMD-9	37.264	100	0.385