Detailed information NTG0540045

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JQX68_RS18135
• Genome accession: NZ_CP070483
• Coordinates: 3561359..3562516 (-)
• Length: 385 a.a.
• NCBI ID: WP_003227983.1
• Uniprot ID: A0A199WDV9
• Organism: Bacillus sp. LJBS06
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3556359..3567516

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JQX68_RS18105 (JQX68_18105)	-	3556611..3557030 (-)	420	WP_014665558.1	TIGR03826 family flagellar region protein	-
JQX68_RS18110 (JQX68_18110)	comFC	3557104..3557826 (-)	723	WP_147772593.1	ComF family protein	Machinery gene
JQX68_RS18115 (JQX68_18115)	comFB	3557790..3558086 (-)	297	WP_014665560.1	late competence protein ComFB	-
JQX68_RS18120 (JQX68_18120)	comFA	3558155..3559537 (-)	1383	WP_147772594.1	ATP-dependent helicase ComFA	Machinery gene
JQX68_RS18125 (JQX68_18125)	-	3559644..3560489 (-)	846	WP_014665562.1	DegV family protein	-
JQX68_RS18130 (JQX68_18130)	degU	3560587..3561276 (-)	690	WP_003219701.1	two-component system response regulator DegU	Regulator
JQX68_RS18135 (JQX68_18135)	degS	3561359..3562516 (-)	1158	WP_003227983.1	two-component sensor histidine kinase DegS	Regulator
JQX68_RS18140 (JQX68_18140)	-	3562733..3563386 (+)	654	WP_014665564.1	YigZ family protein	-
JQX68_RS18145 (JQX68_18145)	tagV	3563386..3564561 (+)	1176	WP_040081662.1	polyisoprenyl-teichoic acid--peptidoglycan teichoic acid transferase TagV	-
JQX68_RS18150 (JQX68_18150)	-	3564633..3565709 (-)	1077	WP_014665566.1	MraY family glycosyltransferase	-
JQX68_RS18155 (JQX68_18155)	-	3565854..3567047 (-)	1194	WP_147772804.1	glycosyltransferase family 1 protein	-

Sequence

Protein

• Length: 385 a.a.
• Molecular weight: 44957.76 Da
• Isoelectric Point: 6.2957

>NTDB_id=540045 JQX68_RS18135 WP_003227983.1 3561359..3562516(-) (degS) [Bacillus sp. LJBS06]
MNKTKMDSKVLDSILMKMLKTVDGSKDEVFQIGEQSRQQYEQLVEELKQIKQQVYEVIELGDKLEVQTRHARNRLSEVSR
NFHRFSEEEIRNAYEKAHKLQVELTMIQQREKQLRERRDDLERRLLGLQEIIERSESLVSQITVVLNYLNQDLREVGLLL
ADAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGAEDGFQEIKNLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLYTTEEYNGKVKIHFQCIGETEDQRLAPQFEVALFRLAQEAVSNALKHSESEEITVKVEI
TKDFVILMIKDNGKGFDLKEAKEKKNKSFGLLGMKERVDLLEGTMTIDSKIGLGTFIMIKVPLSL

Nucleotide

• Length: 1158 bp

>NTDB_id=540045 JQX68_RS18135 WP_003227983.1 3561359..3562516(-) (degS) [Bacillus sp. LJBS06]
ATGAATAAAACAAAGATGGATTCCAAAGTGTTGGATTCTATTTTGATGAAGATGCTGAAAACCGTTGACGGGAGCAAGGA
CGAGGTTTTTCAAATCGGGGAGCAGTCACGCCAGCAGTATGAACAGCTGGTTGAAGAACTGAAACAAATTAAGCAGCAGG
TGTATGAAGTGATTGAGCTTGGCGATAAACTTGAAGTGCAAACCCGCCATGCGAGAAACCGTTTATCCGAGGTCAGCCGT
AATTTTCATAGATTCAGTGAAGAGGAAATCCGCAATGCTTATGAAAAAGCCCATAAGCTGCAGGTAGAATTGACGATGAT
CCAGCAGCGTGAGAAGCAATTGCGCGAACGGCGGGATGATTTGGAGCGCAGATTGCTAGGGCTTCAGGAAATCATTGAGC
GGTCAGAATCATTAGTAAGCCAAATTACAGTTGTGCTTAATTACTTGAACCAGGATCTGCGCGAAGTCGGACTGCTTCTT
GCAGATGCTCAGGCAAAACAGGATTTCGGCTTAAGAATTATTGAGGCGCAGGAAGAAGAGCGAAAAAGAGTTTCAAGAGA
AATCCATGACGGACCCGCTCAAATGCTGGCGAATGTTATGATGAGATCGGAATTAATCGAGCGGATTTTCCGTGACCGGG
GTGCAGAGGACGGATTCCAAGAAATTAAAAATCTCCGTCAAAATGTTCGGAATGCCCTTTACGAAGTGAGAAGGATTATA
TATGATTTAAGACCGATGGCCCTTGATGACCTAGGCCTGATTCCAACTTTAAGAAAATATCTATATACAACCGAAGAATA
TAACGGGAAGGTCAAAATACATTTTCAGTGTATTGGAGAAACAGAGGATCAGCGGCTTGCGCCTCAGTTTGAAGTTGCGC
TCTTCAGGCTCGCACAGGAAGCTGTGTCTAATGCGCTAAAGCATTCTGAATCTGAAGAAATTACAGTCAAAGTTGAAATC
ACAAAGGATTTTGTGATTTTAATGATAAAAGATAACGGTAAAGGGTTCGACCTGAAGGAAGCGAAAGAGAAGAAAAACAA
ATCATTCGGCTTGCTGGGCATGAAAGAAAGAGTAGATTTATTGGAAGGAACGATGACAATAGATTCGAAAATAGGTCTTG
GGACATTTATTATGATTAAGGTTCCGTTATCTCTTTGA

Domains

Predicted by InterproScan.

• Histidine kinase (HisKA_3) (180-248)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Sensor protein DegS (DegS) (12-170)

3D structure

• AlphaFold DB: A0A199WDV9

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	100	100	1