Detailed information    

insolico Bioinformatically predicted

Overview


Name   comX   Type   Regulator
Locus tag   JQX68_RS16150 Genome accession   NZ_CP070483
Coordinates   3166771..3166938 (-) Length   55 a.a.
NCBI ID   WP_003242801.1    Uniprot ID   G9LQ80
Organism   Bacillus sp. LJBS06     
Function   binding to ComP; trigger autophosphorylation of ComP (predicted from homology)   
Competence regulation

Genomic Context


Location: 3161771..3171938
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS16120 (JQX68_16120) - 3162166..3162642 (+) 477 WP_014665187.1 Na+/H+ antiporter subunit E -
  JQX68_RS16125 (JQX68_16125) - 3162642..3162926 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JQX68_RS16130 (JQX68_16130) mnhG 3162910..3163284 (+) 375 WP_014665188.1 monovalent cation/H(+) antiporter subunit G -
  JQX68_RS16135 (JQX68_16135) - 3163323..3163703 (-) 381 WP_069150216.1 hotdog fold thioesterase -
  JQX68_RS16140 (JQX68_16140) comA 3163722..3164366 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JQX68_RS16145 (JQX68_16145) comP 3164447..3166756 (-) 2310 WP_205440345.1 two-component system sensor histidine kinase ComP Regulator
  JQX68_RS16150 (JQX68_16150) comX 3166771..3166938 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  JQX68_RS16155 (JQX68_16155) comQ 3166926..3167825 (-) 900 WP_103750156.1 ComX modifying isoprenyl transferase ComQ Regulator
  JQX68_RS16160 (JQX68_16160) degQ 3168010..3168150 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JQX68_RS16165 (JQX68_16165) - 3168372..3168497 (+) 126 WP_128422565.1 hypothetical protein -
  JQX68_RS16170 (JQX68_16170) - 3168612..3168980 (+) 369 WP_014665193.1 hypothetical protein -
  JQX68_RS16175 (JQX68_16175) pdeH 3168956..3170185 (-) 1230 WP_014665194.1 cyclic di-GMP phosphodiesterase -
  JQX68_RS16180 (JQX68_16180) - 3170321..3171793 (-) 1473 WP_014665195.1 nicotinate phosphoribosyltransferase -

Sequence


Protein


Download         Length: 55 a.a.        Molecular weight: 6518.42 Da        Isoelectric Point: 4.3285

>NTDB_id=540037 JQX68_RS16150 WP_003242801.1 3166771..3166938(-) (comX) [Bacillus sp. LJBS06]
MQDLINYFLNYPEALKKLKNKEACLIGFDVQETETIIKAYNDYYLADPITRQWGD

Nucleotide


Download         Length: 168 bp        

>NTDB_id=540037 JQX68_RS16150 WP_003242801.1 3166771..3166938(-) (comX) [Bacillus sp. LJBS06]
ATGCAAGACCTAATTAACTACTTTTTAAATTATCCTGAGGCTTTAAAAAAATTGAAAAATAAAGAAGCTTGCCTTATAGG
TTTTGATGTGCAAGAAACTGAAACAATAATTAAAGCTTATAATGATTATTATCTGGCTGATCCAATAACCCGTCAATGGG
GTGATTAA

Domains



No domain identified.



Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure
  AlphaFold DB G9LQ80

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comX Bacillus subtilis subsp. subtilis str. 168

100

100

1