Detailed information    

insolico Bioinformatically predicted

Overview


Name   comP   Type   Regulator
Locus tag   JQX68_RS16145 Genome accession   NZ_CP070483
Coordinates   3164447..3166756 (-) Length   769 a.a.
NCBI ID   WP_205440345.1    Uniprot ID   -
Organism   Bacillus sp. LJBS06     
Function   phosphorylation of ComA (predicted from homology)   
Competence regulation

Genomic Context


Location: 3159447..3171756
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  JQX68_RS16105 (JQX68_16105) - 3159914..3160345 (+) 432 WP_014665185.1 Na(+)/H(+) antiporter subunit B -
  JQX68_RS16110 (JQX68_16110) - 3160345..3160686 (+) 342 WP_003220730.1 Na(+)/H(+) antiporter subunit C -
  JQX68_RS16115 (JQX68_16115) - 3160679..3162160 (+) 1482 WP_147772472.1 Na+/H+ antiporter subunit D -
  JQX68_RS16120 (JQX68_16120) - 3162166..3162642 (+) 477 WP_014665187.1 Na+/H+ antiporter subunit E -
  JQX68_RS16125 (JQX68_16125) - 3162642..3162926 (+) 285 WP_003228814.1 Na(+)/H(+) antiporter subunit F1 -
  JQX68_RS16130 (JQX68_16130) mnhG 3162910..3163284 (+) 375 WP_014665188.1 monovalent cation/H(+) antiporter subunit G -
  JQX68_RS16135 (JQX68_16135) - 3163323..3163703 (-) 381 WP_069150216.1 hotdog fold thioesterase -
  JQX68_RS16140 (JQX68_16140) comA 3163722..3164366 (-) 645 WP_003220716.1 two-component system response regulator ComA Regulator
  JQX68_RS16145 (JQX68_16145) comP 3164447..3166756 (-) 2310 WP_205440345.1 two-component system sensor histidine kinase ComP Regulator
  JQX68_RS16150 (JQX68_16150) comX 3166771..3166938 (-) 168 WP_003242801.1 competence pheromone ComX Regulator
  JQX68_RS16155 (JQX68_16155) comQ 3166926..3167825 (-) 900 WP_103750156.1 ComX modifying isoprenyl transferase ComQ Regulator
  JQX68_RS16160 (JQX68_16160) degQ 3168010..3168150 (-) 141 WP_003220708.1 degradation enzyme regulation protein DegQ Regulator
  JQX68_RS16165 (JQX68_16165) - 3168372..3168497 (+) 126 WP_128422565.1 hypothetical protein -
  JQX68_RS16170 (JQX68_16170) - 3168612..3168980 (+) 369 WP_014665193.1 hypothetical protein -
  JQX68_RS16175 (JQX68_16175) pdeH 3168956..3170185 (-) 1230 WP_014665194.1 cyclic di-GMP phosphodiesterase -

Sequence


Protein


Download         Length: 769 a.a.        Molecular weight: 89357.90 Da        Isoelectric Point: 8.2590

>NTDB_id=540036 JQX68_RS16145 WP_205440345.1 3164447..3166756(-) (comP) [Bacillus sp. LJBS06]
MKNLIKKFTIAVIVLSILYISYTTYISMNGIIIGTKIHKNDKSQFMIEEISESSYGQFVGLRQGDIILKINKEKPSDKHL
KWGYLSHINSLDILRSGKKIHLKDFDLVTLNRPYSFFLFVLPLVFYFLSIICIFYILKVNKKRRSFAAYILILLLLDISI
AYISAGGPFRGHIINRYINLFTFISSPILYLQFIQRYLGEIGKTFLNRIYFLYIIPIFNLGIEFFQDYLQVDIDFLATLN
LVSFATLTLFSFSAIYLHLNKYKYAEHSFILKLLILTNTLSFAPFLIFFVLPIIFTGNYIFSALASASLLVLIPFGLVYQ
FVANKMFDIEFILGRMRYYALLAMIPTLLIVGALVLFDVMDIQMNPVRQTVFFFVVMFAVFYFKEVMDFKFRLKRFSEKF
NYQDSIFKYTQLMRGVTSLQQVFKELKNTILDVLLVSKAYTFEVTPDQKVIFLDKHEIGPDWHFYQEEFENVTSEIGKII
EVNQGFLMKVGERGGSSYVLLCLSNINTPRLTRDEISWLKTLSFYTSVSMENVMHIEELMEHLKDLKQEGTNPIWLKKLM
FAIEEKQRSGLARDLHDSVLQDLISLKRQCELFLGDFKKDDNPCREEVQDKLVQMNEQMSDVISMTRETCHELRPQLLYD
LGLVKALSKLVAQQQERVPFHIRLNTGRFTASLDLDSQLNLYRIIQEFLSNAVKHSQATDVLIMLISIQNKIVLHYEDDG
VGFDLEKNTEHSMSMGLSGIKERVRALDGRLRIETSEGKGFKADIEIEL

Nucleotide


Download         Length: 2310 bp        

>NTDB_id=540036 JQX68_RS16145 WP_205440345.1 3164447..3166756(-) (comP) [Bacillus sp. LJBS06]
TTGAAGAACTTAATAAAAAAATTCACAATAGCTGTAATTGTTTTGAGTATCCTTTATATAAGCTATACAACTTATATCAG
TATGAATGGAATTATTATTGGGACTAAGATTCATAAAAATGATAAAAGTCAATTTATGATAGAAGAAATATCGGAATCTT
CATATGGACAATTTGTTGGTCTGAGACAGGGAGACATCATATTAAAAATTAATAAAGAAAAACCTTCAGACAAACATTTG
AAATGGGGATATTTGAGTCATATTAACAGTCTGGATATTTTGAGAAGTGGAAAAAAGATTCATCTCAAAGATTTTGATTT
AGTTACTCTAAATAGACCTTATAGTTTTTTTCTGTTCGTACTTCCTTTGGTTTTTTATTTTTTAAGCATAATATGTATTT
TTTATATACTTAAAGTAAATAAAAAAAGGAGATCATTTGCTGCCTATATTCTTATTCTATTGTTATTAGACATTTCGATA
GCATATATAAGTGCAGGTGGGCCATTTAGAGGACATATAATCAATCGGTATATTAACTTGTTTACTTTTATATCTTCTCC
TATTCTTTATCTTCAATTTATACAAAGATACCTTGGAGAAATAGGTAAAACTTTTTTGAATAGAATCTATTTTCTTTATA
TCATACCAATATTTAATCTTGGTATTGAGTTTTTTCAAGACTATTTACAAGTAGATATTGATTTTTTAGCAACTCTTAAT
TTGGTTTCTTTTGCAACTTTGACTCTATTTTCTTTTTCAGCGATATACTTACATCTTAATAAATATAAATATGCTGAGCA
TTCGTTTATTCTTAAATTACTAATTTTAACAAACACTCTTTCATTTGCGCCTTTTTTGATATTTTTTGTTCTTCCAATAA
TATTTACAGGTAATTATATTTTCTCGGCATTAGCTTCGGCGTCATTACTAGTACTAATTCCGTTCGGGTTAGTATACCAA
TTCGTAGCCAATAAGATGTTTGATATAGAGTTTATCTTAGGAAGAATGAGATACTATGCTCTACTCGCCATGATACCAAC
TCTTCTAATAGTTGGTGCATTAGTTCTGTTTGATGTAATGGACATCCAGATGAACCCTGTGCGTCAAACTGTATTTTTTT
TCGTTGTCATGTTCGCTGTCTTTTATTTTAAAGAGGTCATGGATTTTAAATTTCGGTTAAAACGTTTCTCCGAAAAATTC
AACTATCAGGACAGTATTTTTAAATATACTCAGCTAATGAGGGGTGTAACTTCTCTTCAACAAGTTTTTAAAGAACTGAA
AAATACTATACTGGATGTTTTGCTTGTAAGCAAAGCTTATACCTTTGAGGTTACTCCTGATCAAAAAGTGATATTTTTAG
ATAAGCATGAAATTGGACCGGACTGGCATTTTTATCAAGAGGAATTTGAAAACGTAACTTCAGAAATCGGGAAAATTATT
GAAGTCAATCAGGGTTTTCTTATGAAAGTTGGTGAACGAGGCGGAAGTTCTTATGTTCTGCTTTGTTTATCTAATATTAA
CACTCCTCGGCTAACACGGGATGAGATATCATGGTTGAAAACACTATCTTTCTATACAAGTGTGTCCATGGAAAATGTCA
TGCATATTGAGGAGCTCATGGAACATTTGAAGGACTTAAAACAAGAGGGAACCAACCCCATCTGGCTGAAAAAGCTAATG
TTTGCAATCGAAGAAAAACAGCGTTCAGGACTCGCCCGCGATCTCCACGATTCGGTTCTTCAGGACTTGATTTCCTTAAA
ACGCCAGTGTGAGCTGTTTTTGGGTGATTTTAAAAAGGATGACAATCCGTGCCGTGAAGAAGTGCAGGACAAGCTTGTAC
AGATGAATGAGCAGATGTCAGATGTGATTTCGATGACGAGGGAGACGTGTCATGAGCTGAGGCCGCAGCTTCTGTATGAT
CTTGGATTGGTGAAGGCGCTGTCGAAGCTGGTGGCGCAGCAGCAGGAGCGGGTTCCATTTCATATCCGTTTAAATACCGG
CAGATTTACGGCTTCCCTTGATCTGGATTCGCAGCTGAATTTATACCGGATCATTCAAGAGTTTCTGTCTAATGCGGTCA
AGCACTCTCAGGCGACGGATGTGCTGATTATGCTCATCAGTATACAAAACAAAATTGTTCTTCATTATGAGGACGATGGC
GTTGGGTTTGACCTTGAAAAAAATACTGAACATTCCATGAGCATGGGGCTTTCTGGCATTAAGGAGAGAGTCAGGGCTTT
AGATGGGCGCCTTCGGATTGAAACGAGTGAAGGAAAGGGCTTTAAGGCTGATATTGAAATCGAATTGTAA


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comP Bacillus subtilis subsp. subtilis str. 168

98.96

100

0.99