Detailed information
Bioinformatically predicted
Overview
| Name | clpP | Type | Regulator |
| Locus tag | GGS_RS02240 | Genome accession | NC_018712 |
| Coordinates | 436537..437127 (+) | Length | 196 a.a. |
| NCBI ID | WP_002985850.1 | Uniprot ID | A0A9X8T4H8 |
| Organism | Streptococcus dysgalactiae subsp. equisimilis RE378 | ||
| Function | degradation of ComX (predicted from homology) Competence regulation |
||
Genomic Context
Location: 431537..442127
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| GGS_RS02225 (GGS_0424) | - | 432320..433765 (-) | 1446 | WP_015016716.1 | UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--L- lysine ligase | - |
| GGS_RS02230 (GGS_0425) | - | 433853..435487 (+) | 1635 | WP_015016717.1 | polysaccharide biosynthesis protein | - |
| GGS_RS02235 (GGS_0426) | upp | 435686..436315 (+) | 630 | WP_003058279.1 | uracil phosphoribosyltransferase | - |
| GGS_RS02240 (GGS_0427) | clpP | 436537..437127 (+) | 591 | WP_002985850.1 | ATP-dependent Clp protease proteolytic subunit | Regulator |
| GGS_RS02245 (GGS_0428) | - | 437513..437809 (+) | 297 | WP_003058282.1 | DUF4298 domain-containing protein | - |
| GGS_RS02250 (GGS_0429) | - | 437884..438354 (+) | 471 | WP_003062005.1 | YlbF family regulator | - |
| GGS_RS02255 (GGS_0430) | - | 438330..438620 (+) | 291 | WP_003060978.1 | YlbG family protein | - |
| GGS_RS02260 (GGS_0431) | - | 438869..440041 (+) | 1173 | WP_003058679.1 | ABC transporter substrate-binding protein | - |
| GGS_RS02265 (GGS_0432) | - | 440230..441099 (+) | 870 | WP_015016720.1 | branched-chain amino acid ABC transporter permease | - |
| GGS_RS02270 (GGS_0433) | - | 441103..442056 (+) | 954 | WP_003062562.1 | branched-chain amino acid ABC transporter permease | - |
Sequence
Protein
Download Length: 196 a.a. Molecular weight: 21648.88 Da Isoelectric Point: 5.2834
>NTDB_id=53952 GGS_RS02240 WP_002985850.1 436537..437127(+) (clpP) [Streptococcus dysgalactiae subsp. equisimilis RE378]
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK
MIPVVIEQTSRGERSYDIYSRLLKDRIIMLTGPVEDNMANSVIAQLLFLDAQDNTKDIYLYVNTPGGSVSAGLAIVDTMN
FIKADVQTIVMGMAASMGTVIASSGTKGKRFMLPNAEYMIHQPMGGTGGGTQQTDMAIAAEHLLKTRHRLEKILAQNAGK
TIKQIHKDAERDYWMSAEETLAYGFIDEIMENNELK
Nucleotide
Download Length: 591 bp
>NTDB_id=53952 GGS_RS02240 WP_002985850.1 436537..437127(+) (clpP) [Streptococcus dysgalactiae subsp. equisimilis RE378]
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGACATTTACTCACGCTTATTAAAAGATCGTAT
TATCATGTTGACAGGCCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACCATTGTTATGGGGATGGCCGCTTCTATGGGGACTGTCATTGCTTCATCAGGTACTAA
GGGCAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACACAACAAA
CAGATATGGCCATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCACAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAATAACGAATTAAAATAA
ATGATTCCTGTTGTTATTGAACAAACTAGTCGTGGTGAACGTTCTTATGACATTTACTCACGCTTATTAAAAGATCGTAT
TATCATGTTGACAGGCCCTGTTGAGGACAACATGGCAAACTCTGTCATTGCGCAGCTTTTATTCCTTGATGCTCAGGACA
ATACGAAAGACATTTATTTGTATGTCAACACACCTGGTGGTTCTGTTTCAGCGGGTTTGGCTATTGTCGACACCATGAAC
TTTATCAAAGCTGATGTCCAAACCATTGTTATGGGGATGGCCGCTTCTATGGGGACTGTCATTGCTTCATCAGGTACTAA
GGGCAAACGCTTCATGTTACCAAATGCAGAATACATGATTCACCAACCAATGGGTGGTACAGGTGGTGGTACACAACAAA
CAGATATGGCCATTGCTGCAGAGCACCTCTTAAAAACTCGTCACCGTTTAGAAAAAATCTTAGCACAAAATGCTGGAAAG
ACCATTAAACAAATTCACAAAGATGCTGAACGTGATTATTGGATGAGTGCTGAAGAAACCTTGGCTTACGGTTTCATTGA
TGAAATCATGGAAAATAACGAATTAAAATAA
3D structure
| Source | ID | Structure |
|---|
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| clpP | Streptococcus pyogenes MGAS315 |
100 |
100 |
1 |
| clpP | Streptococcus pyogenes JRS4 |
100 |
100 |
1 |
| clpP | Streptococcus mutans UA159 |
90.816 |
100 |
0.908 |
| clpP | Streptococcus pneumoniae Rx1 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae D39 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae R6 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus pneumoniae TIGR4 |
90.769 |
99.49 |
0.903 |
| clpP | Streptococcus thermophilus LMG 18311 |
89.796 |
100 |
0.898 |
| clpP | Streptococcus thermophilus LMD-9 |
89.796 |
100 |
0.898 |
| clpP | Lactococcus lactis subsp. lactis strain DGCC12653 |
86.224 |
100 |
0.862 |
| clpP | Lactococcus lactis subsp. cremoris KW2 |
85.714 |
100 |
0.857 |
| clpP | Bacillus subtilis subsp. subtilis str. 168 |
57.143 |
100 |
0.571 |
| clpP | Campylobacter jejuni subsp. jejuni NCTC 11168 = ATCC 700819 |
56.995 |
98.469 |
0.561 |