Detailed information NTG0539412

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: JWB57_RS18735
• Genome accession: NZ_CP070358
• Coordinates: 3840378..3841436 (+)
• Length: 352 a.a.
• NCBI ID: WP_002014066.1
• Uniprot ID: N9LI98
• Organism: Acinetobacter baumannii strain AB5075-VUB-itrA::ISAba13
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 3835378..3846436

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JWB57_RS18720 (JWB57_01330)	-	3836484..3836816 (+)	333	WP_000169598.1	hypothetical protein	-
JWB57_RS18725 (JWB57_01335)	-	3836819..3837643 (+)	825	WP_001990541.1	putative RNA methyltransferase	-
JWB57_RS18730 (JWB57_01340)	ponA	3837661..3840216 (-)	2556	WP_000736662.1	penicillin-binding protein PBP1a	-
JWB57_RS18735 (JWB57_01345)	pilM	3840378..3841436 (+)	1059	WP_002014066.1	pilus assembly protein PilM	Machinery gene
JWB57_RS18740 (JWB57_01350)	pilN	3841436..3842077 (+)	642	WP_000201229.1	PilN domain-containing protein	Machinery gene
JWB57_RS18745 (JWB57_01355)	pilO	3842074..3842814 (+)	741	WP_000076101.1	type 4a pilus biogenesis protein PilO	Machinery gene
JWB57_RS18750 (JWB57_01360)	pilP	3842825..3843352 (+)	528	WP_000695059.1	pilus assembly protein PilP	Machinery gene
JWB57_RS18755 (JWB57_01365)	pilQ	3843415..3845580 (+)	2166	WP_001017040.1	type IV pilus secretin PilQ family protein	Machinery gene
JWB57_RS18760 (JWB57_01370)	aroK	3845592..3846161 (+)	570	WP_000643712.1	shikimate kinase AroK	-

Sequence

Protein

• Length: 352 a.a.
• Molecular weight: 39032.59 Da
• Isoelectric Point: 4.4618

>NTDB_id=539412 JWB57_RS18735 WP_002014066.1 3840378..3841436(+) (pilM) [Acinetobacter baumannii strain AB5075-VUB-itrA::ISAba13]
MLRLYRKPNKGLMGVDISSTSVKLLELSVKNGKYWVESYALMPLPENSVVEKNILNPEAVAEALERAMNLANPQTTHAAI
AVPTSTVIHKTIEMDADMSDDEREVQIRVDAEQYIPFPLDEVSLDFEVLPDRLANPNRVNVLLVATRTENVETRVEVLEL
ADLNPKLADVESYAVERAFSVFADSLPMGANTIGILDIGHTMTTLSVMQNGKIIYTREQVFGGKQLTLEIQSRYGLSLEE
ASRAKKDRSLPDDYEIEVLDPFLDAVVQQAARSLQFFFSSSQFNEIDHILLAGGNANIPGLAKLLQQKLGYRVTIANPFL
QMGFSPQVDVQKIENDASSLMVACGLALRSFD

Nucleotide

• Length: 1059 bp

>NTDB_id=539412 JWB57_RS18735 WP_002014066.1 3840378..3841436(+) (pilM) [Acinetobacter baumannii strain AB5075-VUB-itrA::ISAba13]
GTGCTCAGGTTATATCGTAAACCTAATAAGGGGTTAATGGGTGTCGATATTAGTTCGACTTCTGTTAAGTTGTTAGAGCT
CTCTGTCAAGAACGGTAAATATTGGGTAGAAAGCTATGCTTTGATGCCTTTACCCGAAAACAGTGTAGTTGAAAAAAATA
TCTTAAATCCAGAAGCAGTTGCAGAGGCTTTGGAACGGGCGATGAATTTAGCAAATCCCCAAACCACTCATGCTGCAATT
GCTGTTCCGACATCGACGGTTATTCATAAAACTATCGAAATGGATGCAGATATGAGCGATGACGAACGCGAAGTTCAGAT
TCGTGTAGATGCGGAGCAGTATATACCGTTCCCTTTAGATGAGGTGAGCCTTGATTTTGAGGTTTTGCCGGATCGTCTTG
CGAATCCAAATCGTGTAAATGTGCTCTTGGTCGCCACAAGAACAGAAAACGTTGAAACACGCGTTGAAGTGCTTGAATTG
GCAGATTTAAATCCTAAATTGGCTGATGTCGAAAGTTACGCGGTTGAGCGCGCTTTTAGCGTGTTTGCTGATAGCTTACC
GATGGGTGCAAATACCATAGGGATTTTAGATATCGGTCATACCATGACGACATTATCTGTCATGCAAAATGGCAAGATTA
TTTATACACGAGAGCAGGTTTTCGGCGGAAAACAACTTACGCTTGAAATTCAAAGTCGTTATGGTTTGTCTTTAGAAGAA
GCAAGCCGAGCAAAAAAAGATCGCTCTTTACCAGATGATTATGAAATTGAAGTGCTAGACCCATTTCTAGATGCGGTAGT
TCAGCAGGCGGCCCGTTCACTACAATTTTTCTTTTCTTCATCCCAATTTAACGAAATAGACCATATTTTGCTCGCTGGTG
GAAATGCGAATATTCCAGGCCTTGCTAAGCTTTTGCAGCAAAAATTGGGCTACCGTGTCACGATTGCCAACCCGTTTTTA
CAAATGGGCTTTTCTCCTCAAGTCGATGTTCAAAAAATTGAAAATGATGCTTCATCTTTAATGGTGGCATGTGGCTTGGC
TTTAAGGAGTTTTGATTAA

Domains

Predicted by InterproScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-351)

3D structure

• AlphaFold DB: N9LI98

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	100	100	1
comM	Acinetobacter nosocomialis M2	99.148	100	0.991
comM	Acinetobacter baylyi ADP1	81.534	100	0.815
pilM	Legionella pneumophila strain ERS1305867	42.09	100	0.423