Detailed information NTG0539350

Bioinformatically predicted

Overview

• Name: pilM
• Type: Machinery gene
• Locus tag: JVX91_RS02490
• Genome accession: NZ_CP070356
• Coordinates: 535338..536402 (-)
• Length: 354 a.a.
• NCBI ID: WP_205337876.1
• Uniprot ID: -
• Organism: Pseudomonas sp. PDNC002
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 530338..541402

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JVX91_RS02465 (JVX91_02465)	aroK	530858..531376 (-)	519	WP_205337871.1	shikimate kinase AroK	-
JVX91_RS02470 (JVX91_02470)	pilQ	531385..533526 (-)	2142	WP_205337872.1	type IV pilus secretin PilQ	Machinery gene
JVX91_RS02475 (JVX91_02475)	pilP	533580..534104 (-)	525	WP_205337873.1	type 4a pilus biogenesis lipoprotein PilP	-
JVX91_RS02480 (JVX91_02480)	pilO	534101..534745 (-)	645	WP_205337874.1	type 4a pilus biogenesis protein PilO	-
JVX91_RS02485 (JVX91_02485)	pilN	534742..535338 (-)	597	WP_205337875.1	type 4a pilus biogenesis protein PilN	-
JVX91_RS02490 (JVX91_02490)	pilM	535338..536402 (-)	1065	WP_205337876.1	pilus assembly protein PilM	Machinery gene
JVX91_RS02495 (JVX91_02495)	-	536588..539029 (+)	2442	WP_205337877.1	penicillin-binding protein 1A	-
JVX91_RS02500 (JVX91_02500)	-	539218..539685 (+)	468	WP_205337878.1	hypothetical protein	-
JVX91_RS02505 (JVX91_02505)	-	539679..540173 (-)	495	WP_081515415.1	M48 family metallopeptidase	-
JVX91_RS02510 (JVX91_02510)	-	540223..540993 (-)	771	WP_205337879.1	class I SAM-dependent methyltransferase	-

Sequence

Protein

• Length: 354 a.a.
• Molecular weight: 37770.09 Da
• Isoelectric Point: 4.4816

>NTDB_id=539350 JVX91_RS02490 WP_205337876.1 535338..536402(-) (pilM) [Pseudomonas sp. PDNC002]
MLGLFNKKANTLLGIDISSTSVKLLELSRSGGRYKVEAYAVEPLPPNAVVEKNIAELEGVGQALSRVVAKARTPVKTAAV
AVAGSAVITKTIEMDGGLSDDELENQLKIEADQYIPYPLEEVAIDFEVQGTSARNADRVDVLLAACRKENVEVREAALAL
AGLTAKVVDVEAYALERAFSLLGQQLGGNADELTVAVVDIGATMTTLSVLHHGRTIYTREQLFGGRQLTEEIQRRYGLSV
EEAGLAKKQGGLPDDYDSEVLQPFKDAVVQQVSRSLQFFFAAGQFNDVDYILLAGGTASIPDLDRLIQQKIGTPTLVANP
FADMVLSGKVNAGALASDAPALMIACGLAMRSFD

Nucleotide

• Length: 1065 bp

>NTDB_id=539350 JVX91_RS02490 WP_205337876.1 535338..536402(-) (pilM) [Pseudomonas sp. PDNC002]
GTGCTAGGGCTCTTCAATAAGAAAGCGAACACGCTGCTGGGGATAGACATCAGTTCGACTTCGGTCAAACTTCTCGAATT
GAGCCGCTCTGGAGGCCGCTACAAGGTAGAGGCCTACGCTGTCGAGCCGCTCCCGCCCAATGCAGTGGTAGAAAAGAACA
TCGCTGAGCTGGAGGGTGTCGGCCAGGCGTTGTCACGCGTGGTCGCCAAGGCGCGGACCCCCGTGAAAACGGCTGCGGTC
GCAGTTGCCGGCTCGGCGGTCATCACCAAAACCATCGAGATGGACGGCGGCCTCTCGGACGACGAGCTGGAAAATCAGCT
CAAGATCGAAGCCGACCAGTACATCCCCTATCCGCTGGAAGAAGTCGCGATCGACTTCGAAGTCCAGGGTACTTCTGCTC
GCAACGCAGACCGCGTTGACGTACTCCTTGCTGCTTGTCGGAAGGAGAACGTCGAGGTTCGCGAGGCGGCACTGGCGCTT
GCGGGGCTTACGGCGAAGGTCGTCGACGTTGAGGCCTACGCGCTGGAAAGAGCGTTTAGTCTGCTCGGACAGCAGTTGGG
TGGCAATGCCGACGAGCTCACAGTTGCAGTAGTCGACATCGGCGCCACGATGACGACGCTGAGCGTCCTGCACCACGGTC
GCACCATCTACACCCGTGAGCAGTTGTTCGGCGGCCGCCAACTCACCGAGGAAATCCAGCGTCGCTACGGCCTGTCGGTC
GAGGAAGCCGGACTCGCCAAGAAGCAGGGCGGGCTGCCGGACGACTACGACAGCGAGGTGCTGCAGCCGTTCAAGGACGC
CGTAGTCCAGCAAGTGTCGCGCTCCCTCCAGTTCTTCTTCGCAGCCGGTCAGTTCAACGATGTGGACTACATCCTGCTGG
CGGGCGGCACCGCGTCGATTCCTGACCTCGATCGCCTGATCCAGCAGAAGATCGGTACTCCGACGCTGGTCGCGAACCCC
TTCGCCGATATGGTGCTGAGTGGGAAGGTCAATGCCGGCGCGCTGGCAAGTGACGCGCCCGCGCTGATGATTGCCTGCGG
TCTGGCGATGAGGAGTTTCGACTGA

Domains

Predicted by InterProScan.

• Type IV pilus assembly protein PilM; (PilM_2) (14-353)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilM	Acinetobacter baumannii D1279779	57.345	100	0.573
comM	Acinetobacter nosocomialis M2	57.345	100	0.573
comM	Acinetobacter baylyi ADP1	53.39	100	0.534
pilM	Legionella pneumophila strain ERS1305867	46.893	100	0.469