Detailed information NTG0539313

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JVX94_RS17275
• Genome accession: NZ_CP070345
• Coordinates: 3397241..3398416 (+)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus sp. PDNC022
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3392241..3403416

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JVX94_RS17255 (JVX94_17255)	-	3392843..3394039 (+)	1197	WP_240193844.1	glycosyltransferase	-
JVX94_RS17260 (JVX94_17260)	-	3394174..3395241 (+)	1068	WP_048237563.1	MraY family glycosyltransferase	-
JVX94_RS17265 (JVX94_17265)	-	3395277..3396368 (-)	1092	WP_095409678.1	LCP family protein	-
JVX94_RS17270 (JVX94_17270)	-	3396353..3397021 (-)	669	WP_012011434.1	YigZ family protein	-
JVX94_RS17275 (JVX94_17275)	degS	3397241..3398416 (+)	1176	WP_003213166.1	sensor histidine kinase	Regulator
JVX94_RS17280 (JVX94_17280)	degU	3398481..3399170 (+)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
JVX94_RS17285 (JVX94_17285)	-	3399389..3400231 (+)	843	WP_095409677.1	DegV family protein	-
JVX94_RS17290 (JVX94_17290)	comFA	3400352..3401749 (+)	1398	WP_275891453.1	DEAD/DEAH box helicase	Machinery gene
JVX94_RS17295 (JVX94_17295)	-	3401799..3402092 (+)	294	WP_197197640.1	late competence development ComFB family protein	-
JVX94_RS17300 (JVX94_17300)	comFC	3402089..3402775 (+)	687	WP_197197641.1	ComF family protein	Machinery gene
JVX94_RS17305 (JVX94_17305)	-	3402832..3403251 (+)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=539313 JVX94_RS17275 WP_003213166.1 3397241..3398416(+) (degS) [Bacillus sp. PDNC022]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=539313 JVX94_RS17275 WP_003213166.1 3397241..3398416(+) (degS) [Bacillus sp. PDNC022]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGACAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTTAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATCCGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTGGTTCTCAACTATCTCAATCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGAATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACGTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTGGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCTGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGTATGAAAGAACGCGTAGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841