Detailed information NTG0053755

Bioinformatically predicted

Overview

• Name: ruvB
• Type: Machinery gene
• Locus tag: SMSK321_RS09650
• Genome accession: NZ_AEDT01000032
• Coordinates: 22151..23149 (-)
• Length: 332 a.a.
• NCBI ID: WP_025171184.1
• Uniprot ID: -
• Organism: Streptococcus mitis SK321
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 17151..28149

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
SMSK321_RS09635 (SMSK321_1422)	eeP	18400..19659 (-)	1260	WP_000900655.1	RIP metalloprotease RseP	Regulator
SMSK321_RS09640 (SMSK321_1423)	-	19681..20484 (-)	804	WP_000189853.1	phosphatidate cytidylyltransferase	-
SMSK321_RS0102690 (SMSK321_1424)	-	20493..21251 (-)	759	WP_000466719.1	isoprenyl transferase	-
SMSK321_RS0102700	-	21598..22170 (-)	573	WP_025171183.1	nucleotidyltransferase family protein	-
SMSK321_RS09650 (SMSK321_1426)	ruvB	22151..23149 (-)	999	WP_025171184.1	Holliday junction branch migration DNA helicase RuvB	Machinery gene
SMSK321_RS0102705	-	23282..23374 (+)	93	WP_000970294.1	type I toxin-antitoxin system Fst family toxin	-
SMSK321_RS09655 (SMSK321_1427)	-	23952..24371 (-)	420	WP_000628408.1	GNAT family N-acetyltransferase	-
SMSK321_RS09660 (SMSK321_1428)	-	24383..25078 (-)	696	WP_001144935.1	GNAT family N-acetyltransferase	-
SMSK321_RS09665 (SMSK321_1429)	-	25377..26609 (-)	1233	WP_000217705.1	acyl-CoA thioesterase/bile acid-CoA:amino acid N-acyltransferase family protein	-
SMSK321_RS09670 (SMSK321_1430)	-	26666..27121 (-)	456	WP_000358209.1	MarR family winged helix-turn-helix transcriptional regulator	-

Sequence

Protein

• Length: 332 a.a.
• Molecular weight: 37288.68 Da
• Isoelectric Point: 4.4700

>NTDB_id=53755 SMSK321_RS09650 WP_025171184.1 22151..23149(-) (ruvB) [Streptococcus mitis SK321]
MSRILDNEIMGDEELVERTLRPQYLREYIGQDKVKDQLQIFIEAAKMRDEALDHVLLFGPPGLGKTTMAFVIANELGVNL
KQTSGPVIEKAGDLVAILNDLEPGDVLFIDEIHRLPMSVEEVLYSAMEDFYIDIMIGAGEGSRSVHLELPPFTLIGATTR
AGMLSNPLRARFGITGHMEYYAHADLTEIVERTADIFEMEITHEAASELALRSRGTPRIANRLLKRVRDFAQIMGDGVID
DVITDKALTMLDVDHEGLDYVDQKILRTMIEMYGGGPVGLGTLSVNIAEERETVEDMYEPYLIQKGFIMRTRSGRVATAK
TYEHLGYEYNEK

Nucleotide

• Length: 999 bp

>NTDB_id=53755 SMSK321_RS09650 WP_025171184.1 22151..23149(-) (ruvB) [Streptococcus mitis SK321]
ATGAGTAGAATTTTAGATAATGAGATAATGGGGGATGAGGAGTTAGTAGAACGCACGCTCCGTCCTCAGTACTTACGTGA
ATATATTGGACAGGACAAGGTCAAGGACCAGCTCCAAATTTTTATCGAGGCTGCCAAAATGCGGGATGAAGCGCTGGATC
ATGTGCTCTTATTTGGGCCTCCAGGCTTGGGAAAAACGACCATGGCTTTTGTTATTGCCAACGAACTAGGTGTCAATCTC
AAGCAGACGTCTGGGCCTGTCATTGAAAAAGCAGGTGATCTGGTAGCGATTTTGAATGACTTAGAGCCTGGGGATGTCCT
TTTTATTGATGAGATTCATCGCTTGCCCATGTCTGTGGAAGAGGTGCTTTATAGTGCCATGGAAGACTTCTACATTGACA
TCATGATTGGGGCTGGTGAAGGCAGTCGCAGTGTTCATTTGGAGTTGCCACCTTTTACCTTGATTGGTGCGACGACTCGG
GCTGGTATGCTGTCAAATCCGCTACGGGCACGTTTTGGGATTACAGGTCATATGGAGTATTATGCCCATGCTGACTTGAC
GGAAATTGTCGAGCGGACGGCAGATATTTTTGAGATGGAAATTACTCATGAGGCAGCATCTGAGTTGGCCCTACGTAGTC
GAGGTACTCCTCGTATTGCCAATCGCCTCCTCAAGCGCGTGCGCGATTTTGCCCAGATAATGGGGGATGGGGTGATCGAT
GATGTTATTACCGATAAGGCCTTGACCATGCTGGATGTTGACCATGAAGGTTTGGACTATGTGGATCAAAAAATCCTTCG
CACCATGATTGAGATGTACGGTGGTGGTCCTGTTGGTCTAGGGACTCTTTCTGTTAACATAGCAGAAGAGCGCGAGACAG
TTGAAGATATGTATGAGCCTTACTTGATTCAAAAAGGTTTTATCATGCGGACACGTTCTGGACGGGTGGCGACTGCTAAG
ACATATGAGCATTTGGGGTATGAGTACAATGAAAAATAA

Domains

Predicted by InterProScan.

• RuvB AAA lid domain (AAA_lid_4) (181-254)

• Holliday junction DNA helicase RuvB P-loop domain (RuvB_N) (20-178)

• RuvB C-terminal winged helix domain (WHD_RuvB) (256-325)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
ruvB	Streptococcus pneumoniae TIGR4	98.494	100	0.985
ruvB	Streptococcus pneumoniae R6	98.193	100	0.982
ruvB	Streptococcus pneumoniae D39	98.193	100	0.982
ruvB	Bacillus subtilis subsp. subtilis str. 168	60.736	98.193	0.596
ruvB	Helicobacter pylori 26695	51.084	97.289	0.497
ruvB	Synechocystis sp. PCC 6803	47.892	100	0.479