Detailed information NTG0537433

Bioinformatically predicted

Overview

• Name: pptB
• Type: Regulator
• Locus tag: LIO33_RS08040
• Genome accession: NZ_CP085088
• Coordinates: 1622220..1623260 (-)
• Length: 346 a.a.
• NCBI ID: WP_012027749.1
• Uniprot ID: -
• Organism: Streptococcus suis strain Ssuis_MA1
• Function: export ComS (predicted from homology) Competence regulation

Genomic Context

Location: 1617220..1628260

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LIO33_RS08010	-	1617876..1618184 (-)	309	WP_012027746.1	YlxQ-related RNA-binding protein	-
LIO33_RS08015	rnpM	1618171..1618467 (-)	297	WP_002942375.1	RNase P modulator RnpM	-
LIO33_RS08020	nusA	1618484..1619626 (-)	1143	WP_004194726.1	transcription termination factor NusA	-
LIO33_RS08025	rimP	1619700..1620170 (-)	471	WP_002942369.1	ribosome maturation factor RimP	-
LIO33_RS08030	trmB	1620741..1621379 (-)	639	WP_002939002.1	tRNA (guanosine(46)-N7)-methyltransferase TrmB	-
LIO33_RS08035	ccrZ	1621376..1622170 (-)	795	WP_002942360.1	cell cycle regulator CcrZ	-
LIO33_RS08040	pptB	1622220..1623260 (-)	1041	WP_012027749.1	ABC transporter permease	Regulator
LIO33_RS08045	pptA	1623257..1623991 (-)	735	WP_012027751.1	ABC transporter ATP-binding protein	Regulator
LIO33_RS08050	-	1624054..1624467 (+)	414	WP_012027752.1	HIT family protein	-
LIO33_RS08055	-	1624469..1624771 (+)	303	WP_012027753.1	methyl-accepting chemotaxis protein	-
LIO33_RS08060	-	1624880..1626073 (-)	1194	WP_012027754.1	LCP family protein	-
LIO33_RS08065	-	1626070..1626597 (-)	528	WP_012027755.1	GNAT family N-acetyltransferase	-
LIO33_RS08070	tsaE	1626590..1627030 (-)	441	WP_012775330.1	tRNA (adenosine(37)-N6)-threonylcarbamoyltransferase complex ATPase subunit type 1 TsaE	-

Sequence

Protein

• Length: 346 a.a.
• Molecular weight: 40147.52 Da
• Isoelectric Point: 10.1278

>NTDB_id=537433 LIO33_RS08040 WP_012027749.1 1622220..1623260(-) (pptB) [Streptococcus suis strain Ssuis_MA1]
MKELFQQRRLDFLNRCSKYLRYVLNDHFVLVLMVLLGFLSLQYRQLLLSFPENPLPIVLVVIAISLLVLLSGRIATYLEE
ADQIFLLTKEKDILQGLEVAARRTVLFWSSIQVVVQLVLLPIYLKLGLPVWMIVSGLLTLLVLKCLFVKRQLVAYQSQGV
LDWSKAIQDEQKRKQSILRFFALFTTVKGIGTTVKPRSYLNGILRLVKSRQTWFYLYLRAFLRSGDYLGLTIRLLLLAIL
SLFAIEESWLSIGLVLVFHYLLVFQLLGLYKHYDYQYITQLYPLEKDSKKIGLQNLLRVILYSLLVVELGFALLFSKENA
MVVVLLLVGIFLHEIYLPLKLKKLID

Nucleotide

• Length: 1041 bp

>NTDB_id=537433 LIO33_RS08040 WP_012027749.1 1622220..1623260(-) (pptB) [Streptococcus suis strain Ssuis_MA1]
ATGAAAGAATTGTTTCAACAACGCCGACTAGATTTTTTAAATCGTTGTTCCAAGTATCTGCGCTATGTTCTGAATGACCA
TTTTGTTTTGGTTCTCATGGTTTTATTAGGCTTTTTGAGTTTGCAATATCGTCAATTATTGTTGTCATTCCCTGAGAATC
CGTTGCCGATTGTTTTGGTGGTTATTGCAATCAGTCTACTGGTGCTATTGTCCGGAAGAATTGCGACTTATTTAGAAGAA
GCTGATCAAATCTTCCTATTGACCAAGGAAAAAGACATTCTGCAAGGACTCGAGGTTGCAGCCAGACGCACGGTCTTGTT
TTGGTCCTCTATACAGGTGGTGGTTCAGCTTGTTTTGTTACCAATCTATTTGAAACTGGGTTTACCGGTGTGGATGATTG
TATCTGGTCTTCTTACTTTGTTGGTTTTAAAATGTCTTTTTGTCAAGCGCCAATTAGTGGCTTATCAGTCACAGGGAGTA
TTGGACTGGTCTAAGGCTATTCAAGATGAACAAAAAAGGAAACAGTCTATTTTACGTTTCTTTGCCTTATTTACAACGGT
TAAAGGAATCGGTACGACTGTTAAACCGAGAAGCTATCTCAATGGAATCTTGCGTCTCGTCAAGTCGAGACAGACTTGGT
TTTATCTCTACTTACGGGCTTTCTTGCGTTCAGGAGACTACTTGGGCTTGACGATACGTCTACTGTTGTTGGCGATTTTG
TCCCTATTTGCCATTGAAGAATCGTGGTTATCCATCGGCCTAGTTTTAGTCTTTCATTATTTGCTTGTCTTCCAGTTGTT
GGGGCTTTACAAGCATTATGATTATCAATATATAACACAACTGTATCCTCTGGAGAAAGATTCCAAGAAAATTGGTCTTC
AGAATTTGCTTAGAGTGATTTTATATAGTCTATTAGTAGTGGAATTGGGCTTTGCTCTGCTATTTTCTAAAGAGAATGCG
ATGGTAGTCGTCTTACTTCTCGTGGGGATTTTCTTGCATGAAATATATTTGCCTCTAAAATTAAAAAAATTGATTGACTA
A

Domains

Predicted by InterProScan.

• Bacterial ABC transporter protein EcsB (EcsB) (2-158)

• Bacterial ABC transporter protein EcsB (EcsB) (154-329)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pptB	Streptococcus salivarius strain HSISS4	46.023	100	0.468
pptB	Streptococcus thermophilus LMD-9	45.455	100	0.462