Detailed information    

insolico Bioinformatically predicted

Overview


Name   dprA   Type   Machinery gene
Locus tag   I6K89_RS10500 Genome accession   NZ_CP069851
Coordinates   2193660..2194790 (+) Length   376 a.a.
NCBI ID   WP_138060085.1    Uniprot ID   -
Organism   Acinetobacter baumannii strain FDAARGOS_1359     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context


Location: 2188660..2199790
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6K89_RS10475 (I6K89_10475) - 2188921..2189127 (-) 207 WP_000182542.1 hypothetical protein -
  I6K89_RS10480 (I6K89_10480) - 2189181..2191295 (-) 2115 WP_001120679.1 TonB-dependent copper receptor -
  I6K89_RS10485 (I6K89_10485) - 2191367..2191795 (-) 429 WP_000231985.1 DUF2946 family protein -
  I6K89_RS10490 (I6K89_10490) def 2191832..2192362 (-) 531 WP_001196539.1 peptide deformylase -
  I6K89_RS10495 (I6K89_10495) tsaP 2192485..2193639 (+) 1155 WP_000755281.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6K89_RS10500 (I6K89_10500) dprA 2193660..2194790 (+) 1131 WP_138060085.1 DNA-processing protein DprA Machinery gene
  I6K89_RS10505 (I6K89_10505) - 2194841..2195410 (+) 570 WP_000633612.1 L-threonylcarbamoyladenylate synthase -
  I6K89_RS10510 (I6K89_10510) - 2195802..2196722 (-) 921 WP_002000451.1 DMT family transporter -
  I6K89_RS10515 (I6K89_10515) - 2196828..2197478 (-) 651 WP_001984979.1 TetR/AcrR family transcriptional regulator -
  I6K89_RS10520 (I6K89_10520) - 2197615..2198829 (+) 1215 WP_000372838.1 MFS transporter -
  I6K89_RS10525 (I6K89_10525) - 2198851..2199615 (+) 765 WP_000786958.1 AraC family transcriptional regulator -

Sequence


Protein


Download         Length: 376 a.a.        Molecular weight: 41893.49 Da        Isoelectric Point: 6.5465

>NTDB_id=537064 I6K89_RS10500 WP_138060085.1 2193660..2194790(+) (dprA) [Acinetobacter baumannii strain FDAARGOS_1359]
MLTQLSSHHYLTLKVWYLVQHSLVSFKKIIDYFGNCEKATQPDGLAKWSSLGLHANHLKRVNEFQTPQGQAQFEQLVQQV
RQHTDFILTPDDSGYPTQLLPYTDYPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFFISSGLAYG
IDEAAHQGASTHQRTIAVTGTGLDTTYPAQNKKLAEHILAKNGAIITEFLPGTPPLQQNFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILIDHPEQIIEDLALPTQWQSQQQNQTEEANTNTPEIP
EHLIDLYQSLDWVGQNIDQLVVHHNIPVSELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1131 bp        

>NTDB_id=537064 I6K89_RS10500 WP_138060085.1 2193660..2194790(+) (dprA) [Acinetobacter baumannii strain FDAARGOS_1359]
ATGCTCACTCAACTTTCTTCACACCACTACCTCACACTTAAAGTGTGGTATTTGGTGCAGCACTCTTTAGTCAGCTTTAA
AAAAATTATTGATTATTTTGGAAATTGTGAAAAAGCCACTCAACCTGATGGTTTAGCAAAGTGGTCCTCTCTGGGGCTAC
ATGCTAATCACTTAAAGCGTGTAAACGAATTTCAAACGCCCCAAGGTCAAGCGCAGTTTGAACAACTTGTACAACAAGTT
CGTCAGCATACAGATTTTATTTTAACGCCGGATGACTCTGGCTATCCCACTCAATTACTTCCTTATACAGATTATCCACC
TATTATTTTTGGGAAAGGTCAAGCGCAAGCTTTATTGCAACCTCAAATTGCGATTGTCGGTAGCCGAAAGCCAAGCCCAC
ATGGACGACAGGTCGCTTATGATTTTGCCTATTACTTAAGTGAAAAGGGCTTTTTCATTAGTAGCGGTCTGGCTTATGGC
ATTGATGAAGCCGCTCATCAAGGTGCATCTACTCATCAACGTACCATTGCAGTGACGGGTACGGGCTTAGACACTACTTA
TCCAGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTAAAAACGGCGCCATTATTACTGAGTTTTTACCGGGTACAC
CACCATTACAACAAAATTTTCCACGGAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTTTTGGTGGTAGAAGCGACA
TTAAAAAGCGGCTCACTCATCACGGCCAATAAAGCTGCTGAACAAGGTAAAACCGTATTCGCGATTCCGGGTCATATTTA
TAGCGAGTTTCATCAAGGATGCCATCAACTTATCCGTGAAGGTGCAATTTTAATCGACCATCCTGAACAGATTATTGAGG
ATCTTGCTTTACCAACCCAATGGCAAAGTCAGCAACAAAATCAAACTGAAGAAGCTAATACGAATACTCCAGAAATTCCT
GAGCATTTGATTGACCTTTATCAGTCTTTAGACTGGGTGGGACAAAATATTGACCAGCTTGTAGTTCACCATAATATTCC
AGTTTCTGAACTGACCTCTTCACTAATGGAACTAGAACTACTCGGTTTATGTATGCAACAATCAGGGCTGTATTTACGTT
GTCGTTCTTAG


Secondary structure


Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure


Source ID Structure

Transmembrane helices


Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.



Visualization of predicted probability:


Similar proteins


Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii strain A118

98.67

100

0.987

  dprA Acinetobacter baumannii D1279779

97.872

100

0.979

  dprA Acinetobacter baylyi ADP1

69.816

100

0.707

  dprA Vibrio cholerae strain A1552

42.598

88.032

0.375