Detailed information NTG0536769

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LH370_RS16990
• Genome accession: NZ_CP085063
• Coordinates: 3532798..3533781 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196487.1
• Uniprot ID: -
• Organism: Escherichia coli strain P31_YH1_02.21
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 3527798..3538781

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LH370_RS16975 (LH370_16975)	dppA	3529098..3530705 (+)	1608	WP_001222876.1	dipeptide ABC transporter substrate-binding protein DppA	-
LH370_RS16980 (LH370_16980)	dppB	3530856..3531875 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LH370_RS16985 (LH370_16985)	dppC	3531885..3532787 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LH370_RS16990 (LH370_16990)	amiE	3532798..3533781 (+)	984	WP_001196487.1	dipeptide ABC transporter ATP-binding protein	Regulator
LH370_RS16995 (LH370_16995)	dppF	3533778..3534782 (+)	1005	WP_000103574.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LH370_RS17000 (LH370_17000)	yhjV	3534812..3536083 (-)	1272	WP_001521562.1	aromatic amino acid transport family protein	-
LH370_RS17005 (LH370_17005)	-	3536559..3536666 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LH370_RS17010 (LH370_17010)	-	3537043..3537150 (+)	108	WP_000170738.1	type I toxin-antitoxin system toxin Ldr family protein	-
LH370_RS17015 (LH370_17015)	-	3537526..3537633 (+)	108	WP_001521561.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35860.36 Da
• Isoelectric Point: 6.5814

>NTDB_id=536769 LH370_RS16990 WP_001196487.1 3532798..3533781(+) (amiE) [Escherichia coli strain P31_YH1_02.21]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDRCRAEEPALNMLSDGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=536769 LH370_RS16990 WP_001196487.1 3532798..3533781(+) (amiE) [Escherichia coli strain P31_YH1_02.21]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTGGTCGGGATTGTGGGTGAGTCCGGCTCTGGTAAATCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTAATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTACAGCGTATCTCAGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGACCAAAACTGCTGATTGCCGATGAGCCGACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATCGAACTGTTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTGATTACCCATGACC
TGGCGCTGGTGGCGGAAGCGGCACATAAAATCATCGTGATGTATGCAGGCCAGGTGGTGGAAACGGGCGATGCCCACGCC
ATCTTCCATGCGCCGCGTCATCCATATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTCT
GGCGTCGTTGCCAGGTGTTGTTCCCGGCAAGTATGACCGCCCGAACGGCTGCCTGCTTAACCCGCGCTGCCCCTATGCCA
CTGACAGATGTCGCGCTGAAGAACCGGCGCTGAATATGCTCTCTGACGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

• ABC transporter (ABC_tran) (24-181)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.614	98.165	0.428
amiE	Streptococcus thermophilus LMG 18311	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMD-9	43.302	98.165	0.425
oppD	Streptococcus mutans UA159	41.693	97.554	0.407