Detailed information    

insolico Bioinformatically predicted

Overview

Name   cclA/cilC   Type   Machinery gene
Locus tag   I6J38_RS00225 Genome accession   NZ_CP069558
Coordinates   43318..43992 (-) Length   224 a.a.
NCBI ID   WP_020997643.1    Uniprot ID   -
Organism   Streptococcus constellatus strain FDAARGOS_1208     
Function   processing and translocation of ComGC; assembly of the pseudopilus (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 38318..48992
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J38_RS00195 (I6J38_00195) rsmD 38790..39329 (+) 540 WP_037592514.1 16S rRNA (guanine(966)-N(2))-methyltransferase RsmD -
  I6J38_RS00200 (I6J38_00200) coaD 39319..39816 (+) 498 WP_006267255.1 pantetheine-phosphate adenylyltransferase -
  I6J38_RS00205 (I6J38_00205) sepM 39797..40852 (+) 1056 WP_020997642.1 SepM family pheromone-processing serine protease Regulator
  I6J38_RS00210 (I6J38_00210) - 41139..41696 (+) 558 WP_006267391.1 YutD family protein -
  I6J38_RS00215 (I6J38_00215) rlmN 41730..42812 (+) 1083 WP_006267478.1 23S rRNA (adenine(2503)-C(2))-methyltransferase RlmN -
  I6J38_RS00220 (I6J38_00220) - 42805..43323 (+) 519 WP_003070167.1 VanZ family protein -
  I6J38_RS00225 (I6J38_00225) cclA/cilC 43318..43992 (-) 675 WP_020997643.1 prepilin peptidase Machinery gene
  I6J38_RS00230 (I6J38_00230) - 44143..44670 (+) 528 WP_006267546.1 Dps family protein -
  I6J38_RS00235 (I6J38_00235) - 44887..46077 (-) 1191 WP_006267506.1 site-specific integrase -
  I6J38_RS00240 (I6J38_00240) - 46153..46356 (-) 204 WP_002983016.1 excisionase -
  I6J38_RS00245 (I6J38_00245) - 46786..47037 (-) 252 WP_006267285.1 helix-turn-helix domain-containing protein -
  I6J38_RS00250 (I6J38_00250) - 47018..47461 (-) 444 WP_006267609.1 RNA polymerase sigma factor -

Sequence

Protein


Download         Length: 224 a.a.        Molecular weight: 25312.66 Da        Isoelectric Point: 8.5004

>NTDB_id=535499 I6J38_RS00225 WP_020997643.1 43318..43992(-) (cclA/cilC) [Streptococcus constellatus strain FDAARGOS_1208]
MIHFYFFLVGSIVASFLGLVVDRFPEQSIITPASHCNVCRQKLAPRDLIPVLSQLINRLRCRFCNSKIPIRYILLELTGG
CLFLATSLGYLNINRLVLLAMGMTLSLYDQREQEYPLLIWLIFHIFLLFLTSFNLLMVAFLALGILTHFVDLRIGAGDFL
FLASCSTIFHLTEVLLIIQIASIIGLLLFGLKSKKDRLAFVPCLFCGGSILIMIQFIVLHQNAL

Nucleotide


Download         Length: 675 bp        

>NTDB_id=535499 I6J38_RS00225 WP_020997643.1 43318..43992(-) (cclA/cilC) [Streptococcus constellatus strain FDAARGOS_1208]
ATGATTCATTTTTATTTTTTCTTGGTTGGAAGTATTGTAGCTTCCTTTTTAGGACTGGTCGTTGATCGCTTTCCTGAGCA
GTCTATTATCACACCTGCTAGTCATTGCAACGTTTGTAGACAGAAATTAGCACCTCGTGATTTAATTCCTGTTCTTTCAC
AGCTTATCAATCGGCTGCGTTGCCGTTTTTGCAACTCAAAAATTCCCATCCGTTACATCCTTCTAGAACTAACTGGTGGC
TGTCTCTTTCTTGCAACATCTTTAGGTTATCTAAACATCAACCGGCTCGTTTTGCTTGCAATGGGAATGACCTTATCCCT
TTATGATCAAAGAGAACAAGAATATCCTCTCCTCATCTGGTTAATCTTCCATATTTTTCTCCTTTTTTTGACAAGCTTCA
ATCTTTTAATGGTTGCTTTTTTAGCACTTGGGATTTTGACTCACTTCGTTGATTTACGTATCGGTGCAGGAGACTTTCTT
TTTCTGGCATCTTGCTCAACTATTTTTCATCTGACTGAAGTTCTTCTCATTATTCAAATTGCTAGTATCATTGGTCTGCT
CCTTTTTGGTTTAAAATCAAAAAAAGACAGGTTAGCCTTTGTTCCCTGTCTTTTCTGTGGTGGCAGCATCCTGATAATGA
TACAATTTATCGTTCTTCACCAAAATGCCTTATGA

Domains

Predicted by InterProScan.

Bacterial Peptidase A24 N-terminal domain (A24_N_bact)

(8-87)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  cclA/cilC Streptococcus mitis SK321

58.019

94.643

0.549
  cclA/cilC Streptococcus mitis NCTC 12261

57.547

94.643

0.545
  cclA/cilC Streptococcus pneumoniae TIGR4

57.075

94.643

0.54
  cclA/cilC Streptococcus pneumoniae Rx1

56.604

94.643

0.536
  cclA/cilC Streptococcus pneumoniae D39

56.604

94.643

0.536
  cclA/cilC Streptococcus pneumoniae R6

56.604

94.643

0.536