Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | I6K01_RS21445 | Genome accession | NZ_CP069518 |
| Coordinates | 4414699..4415160 (+) | Length | 153 a.a. |
| NCBI ID | WP_000168280.1 | Uniprot ID | A0A5Z3I7W2 |
| Organism | Salmonella enterica strain FDAARGOS_1271 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Genomic Context
Location: 4409699..4420160
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| I6K01_RS21405 (I6K01_21405) | - | 4409910..4410932 (+) | 1023 | WP_223155824.1 | ParA family protein | - |
| I6K01_RS21410 (I6K01_21410) | fumD | 4411079..4411288 (-) | 210 | WP_000834179.1 | fumarate hydratase FumD | - |
| I6K01_RS21415 (I6K01_21415) | - | 4411667..4412029 (+) | 363 | WP_000198433.1 | hypothetical protein | - |
| I6K01_RS21420 (I6K01_21420) | - | 4412107..4412871 (+) | 765 | WP_204107899.1 | pentapeptide repeat-containing protein | - |
| I6K01_RS23660 | - | 4412871..4412996 (+) | 126 | WP_000405108.1 | hypothetical protein | - |
| I6K01_RS21425 (I6K01_21425) | - | 4413146..4413460 (+) | 315 | WP_000776962.1 | superinfection exclusion protein | - |
| I6K01_RS21430 (I6K01_21430) | - | 4413545..4413691 (+) | 147 | WP_001541875.1 | protease FtsH-inhibitory lysogeny factor CIII | - |
| I6K01_RS21435 (I6K01_21435) | kil | 4413684..4413797 (+) | 114 | WP_000361564.1 | host cell division inhibitory peptide Kil | - |
| I6K01_RS23610 | - | 4413794..4413982 (+) | 189 | WP_001552364.1 | hypothetical protein | - |
| I6K01_RS21440 (I6K01_21440) | - | 4413991..4414698 (+) | 708 | WP_000365266.1 | Rad52/Rad22 family DNA repair protein | - |
| I6K01_RS21445 (I6K01_21445) | ssb | 4414699..4415160 (+) | 462 | WP_000168280.1 | single-stranded DNA-binding protein | Machinery gene |
| I6K01_RS21450 (I6K01_21450) | - | 4415223..4415720 (+) | 498 | WP_000572078.1 | HNH endonuclease signature motif containing protein | - |
| I6K01_RS21455 (I6K01_21455) | - | 4415788..4416081 (+) | 294 | WP_000165610.1 | phage anti-RecBCD protein | - |
| I6K01_RS21460 (I6K01_21460) | - | 4416092..4416262 (+) | 171 | WP_001552366.1 | DUF2737 family protein | - |
| I6K01_RS21465 (I6K01_21465) | - | 4416250..4416669 (+) | 420 | WP_001158640.1 | hypothetical protein | - |
| I6K01_RS21470 (I6K01_21470) | - | 4416666..4417025 (+) | 360 | WP_000065087.1 | DUF5448 family protein | - |
| I6K01_RS21475 (I6K01_21475) | - | 4417022..4417423 (+) | 402 | WP_000065339.1 | ParB/RepB/Spo0J family partition protein | - |
| I6K01_RS21480 (I6K01_21480) | - | 4417420..4417944 (+) | 525 | WP_000151007.1 | ead/Ea22-like family protein | - |
| I6K01_RS21485 (I6K01_21485) | - | 4417944..4418417 (+) | 474 | WP_000082798.1 | class I SAM-dependent methyltransferase | - |
| I6K01_RS23615 | - | 4418421..4419119 (+) | 699 | WP_000207891.1 | DUF551 domain-containing protein | - |
| I6K01_RS21495 (I6K01_21495) | - | 4419435..4419701 (+) | 267 | WP_000509169.1 | hypothetical protein | - |
| I6K01_RS21500 (I6K01_21500) | - | 4419947..4420114 (+) | 168 | WP_000545749.1 | hypothetical protein | - |
Sequence
Protein
Download Length: 153 a.a. Molecular weight: 17183.08 Da Isoelectric Point: 6.4805
>NTDB_id=535295 I6K01_RS21445 WP_000168280.1 4414699..4415160(+) (ssb) [Salmonella enterica strain FDAARGOS_1271]
MASRGVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTEWHRVAVVGKLAEVVGQYVKKGDQVYF
EGMLRTRKWQDQTGQDRYTTEINVGINGVMQMLGGTGDNKQQAADRQSQKPQQQSSPAQHNEPPMNFDDEIPF
MASRGVNKVIILGRVGQDPEVRYSPSGTAFANLTVATSEQWRDKQTGEQKEQTEWHRVAVVGKLAEVVGQYVKKGDQVYF
EGMLRTRKWQDQTGQDRYTTEINVGINGVMQMLGGTGDNKQQAADRQSQKPQQQSSPAQHNEPPMNFDDEIPF
Nucleotide
Download Length: 462 bp
>NTDB_id=535295 I6K01_RS21445 WP_000168280.1 4414699..4415160(+) (ssb) [Salmonella enterica strain FDAARGOS_1271]
ATGGCTAGTAGAGGCGTAAATAAGGTGATCATCTTAGGCCGGGTCGGACAAGACCCGGAGGTTCGTTATTCACCATCAGG
GACGGCGTTCGCTAACCTGACAGTCGCTACATCAGAGCAGTGGCGAGATAAACAGACTGGCGAACAAAAGGAGCAGACTG
AATGGCATCGTGTTGCCGTAGTCGGGAAACTTGCTGAAGTCGTAGGGCAGTATGTGAAAAAAGGTGATCAGGTTTATTTC
GAGGGAATGCTGAGAACCAGAAAGTGGCAAGACCAGACAGGGCAAGACCGCTACACCACTGAGATTAATGTTGGAATTAA
TGGTGTGATGCAAATGCTTGGAGGCACTGGCGACAACAAACAACAAGCAGCCGACAGGCAATCACAGAAGCCACAGCAGC
AATCATCACCGGCACAACACAACGAACCTCCTATGAACTTCGACGATGAGATACCATTTTAA
ATGGCTAGTAGAGGCGTAAATAAGGTGATCATCTTAGGCCGGGTCGGACAAGACCCGGAGGTTCGTTATTCACCATCAGG
GACGGCGTTCGCTAACCTGACAGTCGCTACATCAGAGCAGTGGCGAGATAAACAGACTGGCGAACAAAAGGAGCAGACTG
AATGGCATCGTGTTGCCGTAGTCGGGAAACTTGCTGAAGTCGTAGGGCAGTATGTGAAAAAAGGTGATCAGGTTTATTTC
GAGGGAATGCTGAGAACCAGAAAGTGGCAAGACCAGACAGGGCAAGACCGCTACACCACTGAGATTAATGTTGGAATTAA
TGGTGTGATGCAAATGCTTGGAGGCACTGGCGACAACAAACAACAAGCAGCCGACAGGCAATCACAGAAGCCACAGCAGC
AATCATCACCGGCACAACACAACGAACCTCCTATGAACTTCGACGATGAGATACCATTTTAA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
59.322 |
100 |
0.686 |
| ssb | Glaesserella parasuis strain SC1401 |
48.066 |
100 |
0.569 |
| ssb | Neisseria meningitidis MC58 |
39.773 |
100 |
0.458 |
| ssb | Neisseria gonorrhoeae MS11 |
39.773 |
100 |
0.458 |