Detailed information    

insolico Bioinformatically predicted

Overview

Name   dprA   Type   Machinery gene
Locus tag   I6J47_RS12535 Genome accession   NZ_CP069496
Coordinates   2590573..2591706 (+) Length   377 a.a.
NCBI ID   WP_005804749.1    Uniprot ID   A0A009MXX9
Organism   Acinetobacter pittii strain FDAARGOS_1217     
Function   ssDNA binding; loading RecA onto ssDNA (predicted from homology)   
DNA processing

Genomic Context

Location: 2585573..2596706
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  I6J47_RS12510 (I6J47_12510) - 2585829..2586035 (-) 207 WP_005804745.1 hypothetical protein -
  I6J47_RS12515 (I6J47_12515) oprC 2586089..2588203 (-) 2115 WP_068539947.1 TonB-dependent copper receptor -
  I6J47_RS12520 (I6J47_12520) - 2588276..2588701 (-) 426 WP_005804747.1 DUF2946 family protein -
  I6J47_RS12525 (I6J47_12525) def 2588745..2589275 (-) 531 WP_002114101.1 peptide deformylase -
  I6J47_RS12530 (I6J47_12530) tsaP 2589398..2590552 (+) 1155 WP_005804748.1 LysM peptidoglycan-binding domain-containing protein Machinery gene
  I6J47_RS12535 (I6J47_12535) dprA 2590573..2591706 (+) 1134 WP_005804749.1 DNA-processing protein DprA Machinery gene
  I6J47_RS12540 (I6J47_12540) yrdC 2591758..2592327 (+) 570 WP_005804750.1 L-threonylcarbamoyladenylate synthase -
  I6J47_RS12545 (I6J47_12545) - 2592719..2593639 (-) 921 WP_002114137.1 DMT family transporter -
  I6J47_RS12550 (I6J47_12550) - 2593744..2594397 (-) 654 WP_079377716.1 TetR/AcrR family transcriptional regulator -
  I6J47_RS12555 (I6J47_12555) nepI 2594533..2595747 (+) 1215 WP_005804752.1 MFS transporter -
  I6J47_RS12560 (I6J47_12560) yeaM 2595769..2596533 (+) 765 WP_068539945.1 AraC family transcriptional regulator -

Sequence

Protein


Download         Length: 377 a.a.        Molecular weight: 41804.31 Da        Isoelectric Point: 6.5419

>NTDB_id=535092 I6J47_RS12535 WP_005804749.1 2590573..2591706(+) (dprA) [Acinetobacter pittii strain FDAARGOS_1217]
MLTQLSSHHYHTLKVWYLVQHSLVSFKKIVDYFGSCEKAVQPAGLSQWRNLGLHANHLKRVDEFQTAQGQAQFEKLTEQI
QQYTDFILTADDSGYPAQLLPYTDHPPIIFGKGQAQALLQPQIAIVGSRKPSPHGRQVAYDFAYYLSEKGFYVSSGLAYG
IDEAAHQGASAHQRTIAVTGTGLDSTYPAQNKKLAEHILAQNGAIITEFLPGTPPLQQHFPRRNRIVSGLSLGVLVVEAT
LKSGSLITANKAAEQGKTVFAIPGHIYSEFHQGCHQLIREGAILVDHPEQIIEDLALPTQWQSQQQNSTEEAVVSSTPEI
PEHLINLYQSLDWVGQNIDQLVLHHSQPVAELTSSLMELELLGLCMQQSGLYLRCRS

Nucleotide


Download         Length: 1134 bp        

>NTDB_id=535092 I6J47_RS12535 WP_005804749.1 2590573..2591706(+) (dprA) [Acinetobacter pittii strain FDAARGOS_1217]
ATGCTTACTCAACTTTCTTCACACCATTACCACACGCTTAAAGTGTGGTATTTGGTGCAACACTCTTTAGTCAGCTTTAA
AAAAATTGTCGATTATTTTGGTAGCTGTGAAAAGGCGGTCCAACCTGCTGGATTATCTCAATGGCGCAATCTCGGGTTAC
ATGCTAATCATTTAAAACGCGTAGATGAATTTCAAACTGCTCAGGGTCAAGCTCAGTTTGAAAAACTAACTGAGCAGATC
CAGCAATATACCGACTTTATTTTAACGGCAGATGACTCAGGTTATCCCGCTCAGTTATTACCTTATACAGATCATCCACC
TATCATTTTTGGAAAAGGCCAAGCTCAAGCTTTGTTGCAACCACAAATTGCGATTGTAGGTAGCCGAAAACCAAGCCCAC
ATGGTCGTCAGGTTGCTTATGATTTTGCCTATTACTTAAGTGAAAAAGGTTTTTATGTGAGTAGTGGCTTGGCATATGGG
ATTGATGAAGCTGCTCACCAAGGAGCATCAGCACATCAACGTACAATTGCAGTAACAGGAACTGGTTTAGACAGTACCTA
CCCTGCTCAAAATAAAAAACTTGCAGAACATATTTTGGCTCAAAACGGCGCGATTATTACTGAATTTTTGCCTGGAACAC
CCCCATTACAACAGCATTTCCCACGTAGAAACCGAATTGTCAGCGGTTTGAGTTTAGGCGTGTTAGTGGTAGAAGCTACC
TTAAAAAGTGGTTCTCTCATCACTGCGAACAAAGCTGCCGAACAAGGTAAGACTGTATTTGCCATTCCTGGTCATATTTA
CAGTGAGTTTCATCAAGGTTGCCATCAACTTATTCGTGAGGGAGCAATTTTAGTCGATCATCCTGAACAAATTATTGAAG
ACCTTGCTTTACCCACTCAATGGCAAAGTCAGCAACAAAACTCCACCGAGGAGGCTGTAGTTTCTAGTACTCCAGAAATT
CCTGAGCATTTAATTAACCTTTATCAATCTTTAGACTGGGTCGGACAAAATATTGATCAGCTTGTTTTACATCACTCTCA
GCCTGTTGCAGAACTCACCTCTTCACTGATGGAACTAGAACTACTTGGTTTATGTATGCAACAATCAGGATTGTATTTAC
GTTGTCGTTCTTAG

Domains

Predicted by InterproScan.

DNA recombination-mediator protein A (DNA_processg_A)

(86-286)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB A0A009MXX9

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dprA Acinetobacter baumannii D1279779

90.981

100

0.91
  dprA Acinetobacter baumannii strain A118

90.451

100

0.905
  dprA Acinetobacter baylyi ADP1

71.391

100

0.721
  dprA Vibrio cholerae strain A1552

43.844

88.329

0.387