Detailed information NTG0534668

Bioinformatically predicted

Overview

• Name: pilD
• Type: Machinery gene
• Locus tag: I6J32_RS09735
• Genome accession: NZ_CP069437
• Coordinates: 2010936..2011811 (+)
• Length: 291 a.a.
• NCBI ID: WP_204155408.1
• Uniprot ID: -
• Organism: Moraxella osloensis strain FDAARGOS_1202
• Function: assembly of type IV pilus (predicted from homology) DNA binding and uptake

Genomic Context

Location: 2005936..2016811

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
I6J32_RS09715 (I6J32_09725)	secG	2006299..2006619 (-)	321	WP_036594931.1	preprotein translocase subunit SecG	-
I6J32_RS09720 (I6J32_09730)	tpiA	2006711..2007520 (-)	810	WP_204155406.1	triose-phosphate isomerase	-
I6J32_RS09725 (I6J32_09735)	pilB	2007944..2009650 (+)	1707	WP_204155407.1	type IV-A pilus assembly ATPase PilB	Machinery gene
I6J32_RS09730 (I6J32_09740)	pilC	2009707..2010930 (+)	1224	WP_159375395.1	type II secretion system F family protein	Machinery gene
I6J32_RS09735 (I6J32_09745)	pilD	2010936..2011811 (+)	876	WP_204155408.1	prepilin peptidase	Machinery gene
I6J32_RS09740 (I6J32_09750)	coaE	2011808..2012464 (+)	657	WP_228288305.1	dephospho-CoA kinase	-
I6J32_RS09745 (I6J32_09755)	-	2012522..2013928 (-)	1407	WP_204155409.1	nicotinate phosphoribosyltransferase	-
I6J32_RS09750 (I6J32_09760)	-	2013997..2015100 (-)	1104	WP_204155410.1	bifunctional nicotinamide-nucleotide adenylyltransferase/Nudix hydroxylase	-
I6J32_RS09755 (I6J32_09765)	nfuA	2015399..2016016 (+)	618	WP_204155411.1	Fe-S biogenesis protein NfuA	-
I6J32_RS09760 (I6J32_09770)	-	2016060..2016560 (+)	501	WP_100271156.1	winged helix-turn-helix domain-containing protein	-

Sequence

Protein

• Length: 291 a.a.
• Molecular weight: 32215.65 Da
• Isoelectric Point: 8.1651

>NTDB_id=534668 I6J32_RS09735 WP_204155408.1 2010936..2011811(+) (pilD) [Moraxella osloensis strain FDAARGOS_1202]
MGIFSDFILLLQQSQWLTLIIVALLGLCVGSFLNVVIYRTPLMMEQQWKNECQLLLHPETVIDNHESMTLSRPASRCPHC
GHSIRWFENMPVISWLLLKGKCSQCHNAISYRYPLVEIITAILSVLVIIKFGVTWQALAGLALTWTLVALTGIDFDTQLL
PDRFTLPLAALGLFVNAFGLFVSPTAAIFGYVFGFLCLWIVYQLFLLITGKHGMGHGDFKLLAALGAWLGPLMLPLIVLL
SAFVGSVVGVILMKRSGESKPFAFGPYIAIAGMIALLYGQSIMSWYLGKMS

Nucleotide

• Length: 876 bp

>NTDB_id=534668 I6J32_RS09735 WP_204155408.1 2010936..2011811(+) (pilD) [Moraxella osloensis strain FDAARGOS_1202]
ATGGGGATTTTTTCAGATTTTATTTTGTTACTACAACAGTCGCAATGGCTGACGTTGATTATCGTAGCTTTATTGGGATT
ATGCGTGGGCAGTTTTTTAAATGTGGTGATTTATCGCACGCCGTTAATGATGGAGCAGCAGTGGAAGAACGAATGCCAGC
TATTGCTCCATCCAGAAACCGTTATTGATAATCATGAATCCATGACCTTAAGCCGTCCTGCCTCTCGTTGCCCGCATTGT
GGGCATTCAATACGTTGGTTTGAAAATATGCCTGTTATTAGCTGGCTACTGCTAAAAGGGAAATGTAGTCAGTGTCATAA
CGCCATTAGTTATCGTTATCCGCTTGTAGAAATCATCACCGCTATTTTGTCTGTGCTGGTTATTATAAAATTTGGTGTTA
CTTGGCAAGCGCTGGCAGGATTAGCACTCACATGGACATTAGTCGCTTTAACAGGCATTGATTTTGATACCCAATTGTTG
CCTGACCGATTTACATTGCCGTTAGCGGCATTAGGATTATTCGTCAATGCCTTTGGCTTGTTTGTCAGTCCCACAGCGGC
TATTTTTGGCTATGTGTTTGGGTTTTTATGCCTGTGGATTGTGTATCAACTGTTTTTGCTGATTACGGGCAAGCACGGGA
TGGGGCATGGCGATTTTAAATTATTAGCGGCTTTGGGGGCTTGGCTAGGGCCTTTGATGCTACCCTTAATTGTGCTTTTA
TCTGCGTTTGTCGGCTCGGTTGTGGGTGTGATATTGATGAAGCGCTCAGGTGAAAGCAAACCTTTTGCATTTGGACCCTA
TATCGCCATTGCCGGCATGATAGCACTTTTGTATGGGCAATCAATAATGTCGTGGTATCTAGGCAAAATGTCATGA

Domains

Predicted by InterproScan.

• Bacterial Peptidase A24 N-terminal domain (A24_N_bact) (24-131)

• Type IV leader peptidase family (Peptidase_A24) (142-250)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
pilD	Acinetobacter baumannii D1279779	62.676	97.595	0.612
pilD	Acinetobacter nosocomialis M2	62.676	97.595	0.612
pilD	Vibrio campbellii strain DS40M4	48.399	96.564	0.467
pilD	Vibrio cholerae strain A1552	48.905	94.158	0.46
pilD	Neisseria gonorrhoeae MS11	45.185	92.784	0.419