Detailed information NTG0532709

Bioinformatically predicted

Overview

• Name: amiE
• Type: Regulator
• Locus tag: LA372_RS00850
• Genome accession: NZ_CP083585
• Coordinates: 174835..175818 (+)
• Length: 327 a.a.
• NCBI ID: WP_001196484.1
• Uniprot ID: -
• Organism: Escherichia coli strain ECNB21-M121
• Function: internalize XIP (predicted from homology) Competence regulation

Genomic Context

Location: 169835..180818

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LA372_RS00830 (LA372_00830)	dppA	170978..172585 (+)	1608	WP_023308450.1	dipeptide ABC transporter substrate-binding protein DppA	-
LA372_RS00835 (LA372_00835)	-	172648..172875 (-)	228	WP_047623755.1	hypothetical protein	-
LA372_RS00840 (LA372_00840)	dppB	172893..173912 (+)	1020	WP_000938855.1	dipeptide ABC transporter permease DppB	-
LA372_RS00845 (LA372_00845)	dppC	173922..174824 (+)	903	WP_000084677.1	dipeptide ABC transporter permease DppC	-
LA372_RS00850 (LA372_00850)	amiE	174835..175818 (+)	984	WP_001196484.1	dipeptide ABC transporter ATP-binding protein	Regulator
LA372_RS00855 (LA372_00855)	dppF	175815..176819 (+)	1005	WP_000103580.1	dipeptide ABC transporter ATP-binding subunit DppF	-
LA372_RS00860 (LA372_00860)	yhjV	176849..178120 (-)	1272	WP_001313380.1	aromatic amino acid transport family protein	-
LA372_RS00865 (LA372_00865)	-	178596..178703 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-
LA372_RS00870 (LA372_00870)	-	179079..179186 (+)	108	WP_072025054.1	type I toxin-antitoxin system toxin Ldr family protein	-
LA372_RS00875 (LA372_00875)	-	179562..179669 (+)	108	WP_001295224.1	type I toxin-antitoxin system toxin Ldr family protein	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 35816.35 Da
• Isoelectric Point: 6.5813

>NTDB_id=532709 LA372_RS00850 WP_001196484.1 174835..175818(+) (amiE) [Escherichia coli strain ECNB21-M121]
MALLNVDKLSVHFGDESAPFRAVDRISYSVKQGEVVGIVGESGSGKSVSSLAIMGLIDYPGRVMAEKLEFNGQDLQRISE
KERRNLVGAEVAMIFQDPMTSLNPCYTVGFQIMEAIKVHQGGNKSTRRQRAIDLLNQVGIPDPASRLDVYPHQLSGGMSQ
RVMIAMAIACRPKLLIADEPTTALDVTIQAQIIELLLELQQKENMALVLITHDLALVAEAAHKIIVMYAGQVVETGDAHA
IFHAPRHPYTQALLRALPEFAQDKERLASLPGVVPGKYDRPNGCLLNPRCPYATDKCRAEEPALNMLADGRQSKCHYPLD
DAGRPTL

Nucleotide

• Length: 984 bp

>NTDB_id=532709 LA372_RS00850 WP_001196484.1 174835..175818(+) (amiE) [Escherichia coli strain ECNB21-M121]
ATGGCGTTATTAAATGTAGATAAATTATCGGTGCATTTCGGCGACGAAAGCGCACCGTTCCGCGCCGTAGACCGCATCAG
CTACAGCGTAAAACAGGGCGAAGTAGTCGGGATTGTGGGTGAGTCTGGCTCCGGTAAGTCGGTCAGTTCGCTGGCGATTA
TGGGGCTGATTGATTATCCGGGCCGCGTGATGGCGGAAAAGCTGGAGTTTAACGGTCAGGATTTGCAGCGTATCTCGGAA
AAAGAGCGCCGCAACCTGGTGGGTGCCGAAGTGGCGATGATCTTCCAGGACCCGATGACCAGCCTTAACCCGTGCTACAC
CGTGGGTTTCCAGATTATGGAAGCGATTAAGGTGCATCAGGGCGGCAACAAAAGTACCCGCCGTCAGCGGGCGATTGACC
TGCTGAATCAGGTCGGTATTCCCGATCCGGCATCGCGTCTGGATGTTTACCCGCATCAGCTTTCCGGCGGCATGAGCCAG
CGCGTGATGATCGCCATGGCGATTGCCTGTCGGCCAAAACTGCTGATTGCCGATGAACCAACCACTGCGCTGGACGTGAC
CATTCAGGCGCAAATCATTGAACTACTGCTGGAGCTACAGCAGAAAGAGAACATGGCGCTGGTGTTAATTACCCATGACC
TGGCGCTGGTGGCGGAAGCTGCGCATAAAATCATTGTGATGTATGCCGGTCAAGTGGTGGAAACGGGCGATGCTCACGCC
ATCTTCCATGCGCCGCGTCATCCGTATACTCAGGCATTGCTGCGTGCGCTGCCGGAATTTGCTCAGGACAAAGAACGTTT
GGCGTCGTTACCTGGCGTCGTTCCCGGCAAGTATGATCGCCCGAACGGCTGTCTGCTTAATCCGCGCTGCCCCTACGCCA
CTGACAAATGCCGTGCTGAAGAACCGGCGCTGAATATGCTCGCTGATGGGCGTCAGTCCAAATGCCATTACCCACTTGAT
GATGCCGGGAGGCCGACACTATGA

Domains

Predicted by InterProScan.

• ABC transporter (ABC_tran) (24-181)

• Oligopeptide/dipeptide transporter, C-terminal region (oligo_HPY) (233-297)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
amiE	Streptococcus salivarius strain HSISS4	43.302	98.165	0.425
amiE	Streptococcus thermophilus LMG 18311	42.991	98.165	0.422
amiE	Streptococcus thermophilus LMD-9	42.991	98.165	0.422
oppD	Streptococcus mutans UA159	41.379	97.554	0.404