Detailed information
Bioinformatically predicted
Overview
| Name | ssb | Type | Machinery gene |
| Locus tag | JL661_RS00650 | Genome accession | NZ_CP069157 |
| Coordinates | 127609..128130 (+) | Length | 173 a.a. |
| NCBI ID | WP_004238253.1 | Uniprot ID | J7TBA8 |
| Organism | Morganella morganii strain DSM 30164 | ||
| Function | ssDNA binding (predicted from homology) DNA processing |
||
Related MGE
Note: This gene co-localizes with putative mobile genetic elements (MGEs) in the genome predicted by VRprofile2, as detailed below.
Gene-MGE association summary
| MGE type | MGE coordinates | Gene coordinates | Relative position | Distance (bp) |
|---|---|---|---|---|
| Prophage | 70626..128130 | 127609..128130 | within | 0 |
Gene organization within MGE regions
Location: 70626..128130
| Locus tag | Gene name | Coordinates (strand) | Size (bp) | Protein ID | Product | Description |
|---|---|---|---|---|---|---|
| JL661_RS00295 (JL661_00295) | lexA | 70626..71240 (+) | 615 | WP_004238270.1 | transcriptional repressor LexA | - |
| JL661_RS00300 (JL661_00300) | zur | 71319..71837 (-) | 519 | WP_049245999.1 | zinc uptake transcriptional repressor Zur | - |
| JL661_RS00305 (JL661_00305) | - | 72014..72484 (+) | 471 | WP_004238268.1 | YbaK/EbsC family protein | - |
| JL661_RS00310 (JL661_00310) | - | 72520..72873 (-) | 354 | WP_004241537.1 | helix-turn-helix transcriptional regulator | - |
| JL661_RS00315 (JL661_00315) | - | 72928..73140 (-) | 213 | WP_004241538.1 | helix-turn-helix transcriptional regulator | - |
| JL661_RS00320 (JL661_00320) | - | 73900..75081 (+) | 1182 | WP_036418970.1 | multidrug effflux MFS transporter | - |
| JL661_RS00325 (JL661_00325) | - | 75467..75937 (-) | 471 | WP_073970200.1 | oxidoreductase | - |
| JL661_RS00330 (JL661_00330) | - | 75937..76638 (-) | 702 | WP_062773583.1 | DUF3800 domain-containing protein | - |
| JL661_RS00335 (JL661_00335) | - | 76743..76994 (-) | 252 | WP_062773519.1 | pyocin activator PrtN family protein | - |
| JL661_RS18215 | - | 77025..77375 (-) | 351 | WP_247718691.1 | hypothetical protein | - |
| JL661_RS00340 (JL661_00340) | - | 77352..77867 (-) | 516 | Protein_63 | YfbR-like 5'-deoxynucleotidase | - |
| JL661_RS00345 (JL661_00345) | - | 77910..78137 (-) | 228 | WP_062773522.1 | hypothetical protein | - |
| JL661_RS00350 (JL661_00350) | - | 78236..79063 (-) | 828 | WP_062773524.1 | DUF2303 family protein | - |
| JL661_RS00355 (JL661_00355) | - | 79129..79491 (-) | 363 | WP_062773527.1 | hypothetical protein | - |
| JL661_RS00360 (JL661_00360) | - | 79713..79925 (-) | 213 | WP_062773530.1 | hypothetical protein | - |
| JL661_RS00365 (JL661_00365) | - | 80077..80964 (+) | 888 | WP_062773533.1 | BRCT domain-containing protein | - |
| JL661_RS00370 (JL661_00370) | - | 80950..81636 (-) | 687 | WP_062773535.1 | helix-turn-helix transcriptional regulator | - |
| JL661_RS00375 (JL661_00375) | - | 81762..81998 (+) | 237 | WP_024475202.1 | YdaS family helix-turn-helix protein | - |
| JL661_RS00380 (JL661_00380) | - | 82056..82715 (+) | 660 | WP_150974899.1 | hypothetical protein | - |
| JL661_RS00385 (JL661_00385) | - | 82739..83236 (+) | 498 | WP_150974898.1 | YmfL family putative regulatory protein | - |
| JL661_RS00390 (JL661_00390) | - | 83301..83492 (+) | 192 | WP_062773544.1 | hypothetical protein | - |
| JL661_RS00395 (JL661_00395) | - | 83489..83677 (+) | 189 | WP_046024011.1 | DUF4222 domain-containing protein | - |
| JL661_RS00400 (JL661_00400) | - | 83674..84813 (+) | 1140 | WP_062773547.1 | hypothetical protein | - |
| JL661_RS00405 (JL661_00405) | - | 84810..85058 (+) | 249 | WP_062773550.1 | hypothetical protein | - |
| JL661_RS00410 (JL661_00410) | - | 85058..85594 (+) | 537 | WP_062773553.1 | phage N-6-adenine-methyltransferase | - |
| JL661_RS00415 (JL661_00415) | - | 85591..85872 (+) | 282 | WP_218480998.1 | hypothetical protein | - |
| JL661_RS00425 (JL661_00425) | - | 86266..86757 (+) | 492 | WP_150974897.1 | hypothetical protein | - |
| JL661_RS00430 (JL661_00430) | - | 86857..87645 (+) | 789 | WP_062773561.1 | KilA-N domain-containing protein | - |
| JL661_RS00435 (JL661_00435) | - | 87645..88661 (+) | 1017 | WP_062773564.1 | DUF968 domain-containing protein | - |
| JL661_RS00440 (JL661_00440) | - | 88692..89369 (+) | 678 | WP_062773569.1 | bacteriophage antitermination protein Q | - |
| JL661_RS00445 (JL661_00445) | - | 90004..90300 (+) | 297 | WP_150974950.1 | hypothetical protein | - |
| JL661_RS00450 (JL661_00450) | - | 90350..90904 (-) | 555 | WP_049246077.1 | hypothetical protein | - |
| JL661_RS00455 (JL661_00455) | - | 90925..91236 (+) | 312 | WP_062773576.1 | hypothetical protein | - |
| JL661_RS00460 (JL661_00460) | - | 91479..91670 (+) | 192 | WP_062773578.1 | phage holin family protein | - |
| JL661_RS00465 (JL661_00465) | - | 91663..92139 (+) | 477 | WP_151298199.1 | lysozyme | - |
| JL661_RS00470 (JL661_00470) | - | 92121..92279 (+) | 159 | WP_164091680.1 | hypothetical protein | - |
| JL661_RS00475 (JL661_00475) | - | 92276..92728 (+) | 453 | WP_062773665.1 | lysis protein | - |
| JL661_RS00480 (JL661_00480) | - | 92757..92942 (+) | 186 | WP_004242385.1 | hypothetical protein | - |
| JL661_RS00485 (JL661_00485) | - | 93266..93769 (+) | 504 | WP_024474667.1 | DUF1441 family protein | - |
| JL661_RS00490 (JL661_00490) | - | 93766..95879 (+) | 2114 | Protein_92 | phage terminase large subunit family protein | - |
| JL661_RS00495 (JL661_00495) | - | 95876..96094 (+) | 219 | WP_004242389.1 | hypothetical protein | - |
| JL661_RS00500 (JL661_00500) | - | 96091..97566 (+) | 1476 | WP_151298198.1 | phage portal protein | - |
| JL661_RS00505 (JL661_00505) | - | 97538..99574 (+) | 2037 | WP_062773636.1 | ClpP-like prohead protease/major capsid protein fusion protein | - |
| JL661_RS00510 (JL661_00510) | - | 99660..100001 (+) | 342 | WP_024474671.1 | capsid cement protein | - |
| JL661_RS00515 (JL661_00515) | - | 100006..100284 (+) | 279 | WP_062773633.1 | ATP-binding protein | - |
| JL661_RS00520 (JL661_00520) | - | 100286..100849 (+) | 564 | WP_024474672.1 | phage tail protein | - |
| JL661_RS00525 (JL661_00525) | - | 100849..101247 (+) | 399 | WP_004242399.1 | phage minor tail U family protein | - |
| JL661_RS00530 (JL661_00530) | - | 101257..101721 (+) | 465 | Protein_100 | phage tail tube protein | - |
| JL661_RS00535 (JL661_00535) | - | 101788..102186 (+) | 399 | WP_004242401.1 | phage minor tail protein G | - |
| JL661_RS00540 (JL661_00540) | - | 102252..102518 (+) | 267 | WP_004242403.1 | phage tail assembly protein T | - |
| JL661_RS00545 (JL661_00545) | - | 102499..104874 (+) | 2376 | WP_218480999.1 | phage tail length tape measure family protein | - |
| JL661_RS00550 (JL661_00550) | - | 104915..105427 (+) | 513 | WP_247709716.1 | phage tail tape measure C-terminal domain-containing protein | - |
| JL661_RS00555 (JL661_00555) | - | 105430..105759 (+) | 330 | WP_004242405.1 | phage tail protein | - |
| JL661_RS00560 (JL661_00560) | - | 106262..107044 (+) | 783 | WP_004242407.1 | KilA-N domain-containing protein | - |
| JL661_RS00565 (JL661_00565) | - | 107056..107754 (+) | 699 | WP_062773628.1 | phage minor tail protein L | - |
| JL661_RS00570 (JL661_00570) | - | 107772..108500 (+) | 729 | WP_004242409.1 | C40 family peptidase | - |
| JL661_RS00575 (JL661_00575) | - | 108404..109049 (+) | 646 | Protein_109 | tail assembly protein | - |
| JL661_RS00580 (JL661_00580) | - | 109062..112223 (+) | 3162 | WP_205439564.1 | host specificity protein J | - |
| JL661_RS00585 (JL661_00585) | - | 112223..112585 (+) | 363 | WP_205814257.1 | hypothetical protein | - |
| JL661_RS00590 (JL661_00590) | - | 112587..113201 (+) | 615 | WP_036421961.1 | hypothetical protein | - |
| JL661_RS18220 | - | 113267..114847 (+) | 1581 | WP_062773493.1 | hypothetical protein | - |
| JL661_RS00600 (JL661_00600) | - | 115013..115957 (-) | 945 | WP_024475195.1 | hypothetical protein | - |
| JL661_RS00605 (JL661_00605) | - | 116271..117353 (-) | 1083 | WP_062773495.1 | site-specific integrase | - |
| JL661_RS00610 (JL661_00610) | dusA | 117443..118489 (+) | 1047 | WP_036418952.1 | tRNA dihydrouridine(20/20a) synthase DusA | - |
| JL661_RS00615 (JL661_00615) | - | 118540..118854 (-) | 315 | WP_004241541.1 | hypothetical protein | - |
| JL661_RS00620 (JL661_00620) | - | 119016..119999 (-) | 984 | WP_004238260.1 | quinone oxidoreductase | - |
| JL661_RS00625 (JL661_00625) | dnaB | 120232..121638 (+) | 1407 | WP_015422419.1 | replicative DNA helicase | - |
| JL661_RS00630 (JL661_00630) | alr | 121718..122797 (+) | 1080 | WP_036418946.1 | alanine racemase | - |
| JL661_RS00635 (JL661_00635) | - | 122853..124049 (+) | 1197 | WP_036418943.1 | amino acid aminotransferase | - |
| JL661_RS00640 (JL661_00640) | - | 124101..124367 (-) | 267 | WP_036418940.1 | DksA/TraR family C4-type zinc finger protein | - |
| JL661_RS00645 (JL661_00645) | uvrA | 124499..127332 (-) | 2834 | Protein_123 | excinuclease ABC subunit UvrA | - |
| JL661_RS00650 (JL661_00650) | ssb | 127609..128130 (+) | 522 | WP_004238253.1 | single-stranded DNA-binding protein | Machinery gene |
Sequence
Protein
Download Length: 173 a.a. Molecular weight: 18770.82 Da Isoelectric Point: 4.9567
>NTDB_id=532504 JL661_RS00650 WP_004238253.1 127609..128130(+) (ssb) [Morganella morganii strain DSM 30164]
MASRGVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLKKGSQVYI
EGSLQTRKWQDQSGQERYTTEVVVNIGGSMQMLGGRSGGGDNMSQGGGWGQPQQPQQSQQFSGGGNPRPAQQPAAAAPQS
NEPPMDFDDDIPF
MASRGVNKVILIGNLGQDPEVRYMPNGGAVTNITLATSESWRDKQTGEMKEKTEWHRVVIFGKLAEIAGEYLKKGSQVYI
EGSLQTRKWQDQSGQERYTTEVVVNIGGSMQMLGGRSGGGDNMSQGGGWGQPQQPQQSQQFSGGGNPRPAQQPAAAAPQS
NEPPMDFDDDIPF
Nucleotide
Download Length: 522 bp
>NTDB_id=532504 JL661_RS00650 WP_004238253.1 127609..128130(+) (ssb) [Morganella morganii strain DSM 30164]
ATGGCCAGCAGAGGCGTCAACAAAGTCATTCTTATCGGGAACCTGGGTCAGGATCCGGAAGTGCGTTACATGCCTAACGG
CGGTGCGGTTACCAACATCACACTGGCGACATCAGAATCATGGCGTGATAAACAAACCGGCGAAATGAAAGAGAAGACCG
AATGGCACCGTGTGGTGATCTTCGGCAAACTGGCAGAAATTGCCGGTGAATATCTGAAAAAAGGTTCACAGGTTTATATC
GAAGGTTCACTCCAGACCCGCAAATGGCAGGATCAGAGCGGCCAGGAGCGTTACACCACAGAAGTCGTGGTGAATATCGG
CGGCAGCATGCAGATGCTGGGCGGCCGCAGCGGCGGTGGCGACAATATGTCTCAGGGCGGCGGCTGGGGTCAGCCACAGC
AGCCACAACAATCCCAGCAGTTCAGCGGCGGCGGCAACCCGCGCCCGGCACAGCAGCCGGCAGCAGCAGCGCCGCAAAGC
AATGAACCGCCAATGGATTTCGATGACGATATTCCGTTCTGA
ATGGCCAGCAGAGGCGTCAACAAAGTCATTCTTATCGGGAACCTGGGTCAGGATCCGGAAGTGCGTTACATGCCTAACGG
CGGTGCGGTTACCAACATCACACTGGCGACATCAGAATCATGGCGTGATAAACAAACCGGCGAAATGAAAGAGAAGACCG
AATGGCACCGTGTGGTGATCTTCGGCAAACTGGCAGAAATTGCCGGTGAATATCTGAAAAAAGGTTCACAGGTTTATATC
GAAGGTTCACTCCAGACCCGCAAATGGCAGGATCAGAGCGGCCAGGAGCGTTACACCACAGAAGTCGTGGTGAATATCGG
CGGCAGCATGCAGATGCTGGGCGGCCGCAGCGGCGGTGGCGACAATATGTCTCAGGGCGGCGGCTGGGGTCAGCCACAGC
AGCCACAACAATCCCAGCAGTTCAGCGGCGGCGGCAACCCGCGCCCGGCACAGCAGCCGGCAGCAGCAGCGCCGCAAAGC
AATGAACCGCCAATGGATTTCGATGACGATATTCCGTTCTGA
Similar proteins
Only experimentally validated proteins are listed.
| Protein | Organism | Identities (%) | Coverage (%) | Ha-value |
|---|---|---|---|---|
| ssb | Vibrio cholerae strain A1552 |
69.73 |
100 |
0.746 |
| ssb | Glaesserella parasuis strain SC1401 |
57.297 |
100 |
0.613 |
| ssb | Neisseria meningitidis MC58 |
48.864 |
100 |
0.497 |
| ssb | Neisseria gonorrhoeae MS11 |
48.864 |
100 |
0.497 |