Detailed information NTG0532168

Bioinformatically predicted

Overview

• Name: comEC/celB
• Type: Machinery gene
• Locus tag: JOA01_RS03055
• Genome accession: NZ_CP069079
• Coordinates: 598659..600896 (+)
• Length: 745 a.a.
• NCBI ID: WP_217374834.1
• Uniprot ID: -
• Organism: Streptococcus parasuis strain BS26
• Function: ssDNA transport into the cell (predicted from homology) DNA binding and uptake

Genomic Context

Location: 593659..605896

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JOA01_RS03025 (JOA01_03030)	-	594933..595339 (+)	407	Protein_563	GNAT family N-acetyltransferase	-
JOA01_RS03030 (JOA01_03035)	-	595460..596071 (+)	612	WP_217374829.1	FMN-dependent NADH-azoreductase	-
JOA01_RS03035 (JOA01_03040)	-	596089..596361 (-)	273	WP_217374830.1	GIY-YIG nuclease family protein	-
JOA01_RS03040 (JOA01_03045)	-	596351..597097 (-)	747	WP_217374831.1	tRNA1(Val) (adenine(37)-N6)-methyltransferase	-
JOA01_RS03045 (JOA01_03050)	-	597189..597932 (+)	744	WP_217374832.1	1-acyl-sn-glycerol-3-phosphate acyltransferase	-
JOA01_RS03050 (JOA01_03055)	-	597998..598675 (+)	678	WP_217374833.1	helix-hairpin-helix domain-containing protein	-
JOA01_RS03055 (JOA01_03060)	comEC/celB	598659..600896 (+)	2238	WP_217374834.1	DNA internalization-related competence protein ComEC/Rec2	Machinery gene
JOA01_RS03060 (JOA01_03065)	holA	600960..601991 (+)	1032	WP_217374835.1	DNA polymerase III subunit delta	-
JOA01_RS03065 (JOA01_03070)	sodA	602068..602673 (+)	606	WP_217374836.1	superoxide dismutase	-
JOA01_RS03070 (JOA01_03075)	rplS	602875..603222 (+)	348	WP_011921928.1	50S ribosomal protein L19	-
JOA01_RS03075 (JOA01_03080)	-	603495..605234 (+)	1740	WP_217374837.1	ABC transporter ATP-binding protein	-

Sequence

Protein

• Length: 745 a.a.
• Molecular weight: 84494.70 Da
• Isoelectric Point: 6.9943

>NTDB_id=532168 JOA01_RS03055 WP_217374834.1 598659..600896(+) (comEC/celB) [Streptococcus parasuis strain BS26]
MSRLIRLPCQPIHFAVLAVLAYFAVHSFSLLTMSLLSLLLAVFRLRQGKVVFIRTLPLLALCGLFFGCQKIQWERTNQWA
PEQVTTVQVIPDTIDVNGDSLSFRGRAEGQVFQVFYKVASQEEQTYFHELTDLVQLEVDAEVCQPAGQRNFNGFDYQAYL
KTQGIYRTVKISTINNILPVHSWNIFDWLSTWRRQALVYIKSHFPAPMSHYMTGLLLGELDSDFDQMSDLYSSLGIIHLF
ALSGMQVGFFIDKFRWLLLRLGLTKETVDKLQIPFSLIYAGLTGFSVSVVRSLVQKILGNLGLRKLDNFAATVFVCLLLM
PRFLLTAGGVLTFTYALLLTVFDFEELGQLKKIAVESLSISLGILPVLMTYFFAFQPLSILLTFVFSFVFDVLLLPGLSV
ILLLSPFIKITWVNGFFILMEKIIVWVAELGIRPWILGKPTGLVFLLLLFCLFLLYDFHREKKWLLGLSLILALLFFITK
HPLENEVTVVDVGQGDSIFLRDIRGRTVLIDVGGRVDFAAKEAWRERAREANAERTLIPYLHSRGEDRIDDLVLTHTDAD
HVGDVLEVAKQIQIGKIYVSPGSLTVPDFVATLRRINVPVHVVNPGDRLPIFDSYLEVLYPNRIGDGGNNDSIVLYGRLL
KMNFLFTGDLEQGELDLITSYPQLPVDVLKAGHHGSKGSSYPEFLDHIGAKIALISAGENNRYQHPHKETLERLDSQNMQ
VYRTDLQGAIRFRGWKQWSIETVKE

Nucleotide

• Length: 2238 bp

>NTDB_id=532168 JOA01_RS03055 WP_217374834.1 598659..600896(+) (comEC/celB) [Streptococcus parasuis strain BS26]
ATGTCACGGTTGATTAGACTCCCCTGTCAGCCCATTCACTTTGCAGTTTTGGCGGTGTTAGCCTACTTTGCCGTTCACTC
TTTTTCCCTTTTGACAATGAGCCTGCTGAGTCTGTTACTAGCAGTCTTTAGGCTTCGGCAAGGAAAGGTGGTCTTCATCA
GAACGCTACCGCTTTTAGCCTTATGTGGTCTCTTCTTCGGATGTCAGAAGATACAATGGGAGCGGACAAATCAATGGGCT
CCAGAGCAAGTGACAACTGTGCAGGTTATTCCTGATACCATTGATGTCAACGGAGACAGTCTATCTTTTCGTGGTCGGGC
TGAAGGTCAAGTTTTTCAGGTTTTCTATAAAGTTGCAAGTCAGGAAGAACAAACCTACTTTCATGAGCTTACGGACTTGG
TGCAGTTAGAGGTAGATGCAGAAGTTTGCCAACCAGCAGGTCAACGTAATTTCAATGGTTTTGATTATCAGGCTTATCTC
AAAACCCAGGGCATCTATCGGACAGTAAAAATAAGTACCATTAACAATATTCTCCCTGTTCATTCTTGGAATATCTTTGA
CTGGTTGTCAACCTGGCGGAGGCAGGCTCTCGTTTATATCAAATCTCATTTTCCTGCTCCCATGAGCCACTACATGACTG
GATTACTATTGGGAGAGTTAGATAGTGACTTTGACCAAATGAGTGACCTCTATTCTAGTTTAGGGATCATTCATCTTTTT
GCCCTGTCTGGGATGCAGGTTGGTTTTTTCATTGACAAATTTCGCTGGCTTTTATTGCGTTTGGGTTTAACAAAGGAAAC
TGTCGATAAACTTCAAATTCCGTTTTCTCTTATTTATGCAGGATTAACAGGATTTTCAGTATCAGTCGTGCGGTCCTTGG
TCCAGAAAATTCTTGGTAATCTCGGGCTACGAAAATTGGATAATTTTGCAGCAACTGTCTTTGTTTGTCTCTTGCTTATG
CCACGTTTTCTTCTGACAGCAGGAGGTGTGCTGACATTTACCTATGCTTTATTATTGACAGTCTTTGATTTTGAAGAGCT
AGGGCAGCTAAAAAAGATAGCAGTGGAGAGTCTGAGTATTTCTCTTGGGATTTTACCGGTCTTGATGACCTATTTTTTTG
CCTTTCAGCCCTTATCTATCCTTTTAACGTTTGTTTTTTCCTTTGTTTTTGATGTGTTGTTGTTACCTGGGCTATCTGTC
ATTCTTTTACTATCGCCCTTCATTAAAATTACGTGGGTCAACGGATTCTTTATCCTTATGGAAAAGATTATTGTATGGGT
GGCAGAATTGGGGATTCGACCTTGGATTTTAGGAAAACCTACGGGCCTTGTCTTTTTGCTCTTGCTGTTCTGCCTTTTCT
TGCTTTATGATTTTCACAGAGAGAAGAAATGGCTCCTTGGATTGAGTCTGATCCTTGCTCTGCTATTTTTCATAACCAAA
CACCCGCTGGAAAATGAGGTGACGGTGGTAGACGTAGGGCAGGGGGATAGTATCTTTTTGCGGGACATTCGGGGGCGGAC
GGTTCTGATTGATGTGGGTGGTCGGGTTGACTTTGCTGCAAAGGAAGCTTGGCGGGAGCGGGCTAGGGAAGCAAATGCGG
AGCGAACACTGATTCCTTACCTGCATAGTCGAGGTGAGGATCGGATTGATGATTTGGTTTTGACCCATACCGATGCAGAT
CATGTGGGTGATGTGCTAGAAGTGGCTAAGCAGATTCAAATAGGTAAGATTTACGTTTCTCCAGGTAGTTTGACTGTACC
AGATTTTGTTGCGACTTTGAGGAGAATAAATGTCCCTGTTCATGTTGTAAATCCTGGAGATCGATTGCCCATTTTTGATT
CCTATCTAGAAGTTCTATATCCCAATAGAATCGGAGATGGAGGCAATAATGACTCAATTGTACTCTATGGTCGTTTGTTA
AAAATGAATTTTCTCTTTACCGGTGACTTGGAGCAAGGGGAATTAGATTTAATCACTTCTTATCCGCAGCTACCAGTCGA
TGTGCTGAAAGCAGGTCACCATGGTTCCAAGGGCTCTTCATATCCAGAATTTTTAGACCATATTGGAGCAAAAATTGCTC
TGATTTCTGCTGGTGAAAATAATCGCTATCAACATCCACATAAGGAAACTCTGGAACGTCTTGACAGTCAAAATATGCAG
GTTTACCGAACGGATCTGCAAGGAGCTATCCGTTTCCGAGGTTGGAAACAGTGGAGTATTGAAACGGTAAAAGAGTGA

Domains

Predicted by InterproScan.

• Competence protein (Competence) (215-458)

• Metallo-beta-lactamase superfamily (Lactamase_B) (491-698)

• Domain of unknown function (DUF4131) (DUF4131) (29-176)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
comEC/celB	Streptococcus mitis SK321	53.949	100	0.541
comEC/celB	Streptococcus mitis NCTC 12261	52.83	99.597	0.526
comEC/celB	Streptococcus pneumoniae TIGR4	51.817	99.732	0.517
comEC/celB	Streptococcus pneumoniae Rx1	51.279	99.732	0.511
comEC/celB	Streptococcus pneumoniae D39	51.279	99.732	0.511
comEC/celB	Streptococcus pneumoniae R6	51.279	99.732	0.511
comEC	Lactococcus lactis subsp. cremoris KW2	46.996	100	0.472