Detailed information NTG0532073

Bioinformatically predicted

Overview

• Name: degS
• Type: Regulator
• Locus tag: JNE45_RS16450
• Genome accession: NZ_CP069061
• Coordinates: 3227985..3229160 (-)
• Length: 391 a.a.
• NCBI ID: WP_003213166.1
• Uniprot ID: -
• Organism: Bacillus safensis strain F6
• Function: phosphorylation of DegU (predicted from homology) Competence regulation

Genomic Context

Location: 3222985..3234160

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
JNE45_RS16420 (JNE45_16420)	-	3223153..3223572 (-)	420	WP_039181808.1	TIGR03826 family flagellar region protein	-
JNE45_RS16425 (JNE45_16425)	comFC	3223629..3224315 (-)	687	WP_186437285.1	ComF family protein	Machinery gene
JNE45_RS16430 (JNE45_16430)	-	3224312..3224605 (-)	294	WP_041088040.1	late competence development ComFB family protein	-
JNE45_RS16435 (JNE45_16435)	comFA	3224655..3226052 (-)	1398	WP_274382373.1	DEAD/DEAH box helicase	Machinery gene
JNE45_RS16440 (JNE45_16440)	-	3226173..3227015 (-)	843	WP_203128907.1	DegV family protein	-
JNE45_RS16445 (JNE45_16445)	degU	3227231..3227920 (-)	690	WP_008348273.1	two-component system response regulator DegU	Regulator
JNE45_RS16450 (JNE45_16450)	degS	3227985..3229160 (-)	1176	WP_003213166.1	sensor histidine kinase	Regulator
JNE45_RS16455 (JNE45_16455)	-	3229380..3230048 (+)	669	WP_012011434.1	YigZ family protein	-
JNE45_RS16460 (JNE45_16460)	-	3230033..3231124 (+)	1092	WP_095409678.1	LCP family protein	-
JNE45_RS16465 (JNE45_16465)	-	3231160..3232227 (-)	1068	WP_048237563.1	glycosyltransferase family 4 protein	-
JNE45_RS16470 (JNE45_16470)	tuaH	3232362..3233561 (-)	1200	WP_203128908.1	teichuronic acid biosynthesis protein TuaH	-

Sequence

Protein

• Length: 391 a.a.
• Molecular weight: 45523.25 Da
• Isoelectric Point: 5.8757

>NTDB_id=532073 JNE45_RS16450 WP_003213166.1 3227985..3229160(-) (degS) [Bacillus safensis strain F6]
MTTPKMDPKLLDSIIMKMLSTVDGSKDEVFRIGEQSRQQYESLVEELKQIKQQVNEVIDFGDKLEVHTRHARNRLSEVSR
NFNKFSEEEIREAYEKAHNLQVELTMIQQREKQLRERRDDLERRLLSLQDVIERSETLVSQITVVLNYLNQDLRQVGVLL
EDAQAKQDFGLRIIEAQEEERKRVSREIHDGPAQMLANVMMRSELIERIFRDRGTEEGFKEIRSLRQNVRNALYEVRRII
YDLRPMALDDLGLIPTLRKYLNTIEEYDGKTKITFQCLGDTESERIASQFEVALFRLAQEAVTNSLKHSEAEEISVKVEV
TKDFVTLIIKDDGKGFDMKDVKTNKNKSFGLLGMKERVDLLEGKMTIDSKIGLGTFIMIRVPLTLQNKIVK

Nucleotide

• Length: 1176 bp

>NTDB_id=532073 JNE45_RS16450 WP_003213166.1 3227985..3229160(-) (degS) [Bacillus safensis strain F6]
ATGACAACACCCAAAATGGATCCGAAATTATTGGATTCAATCATCATGAAAATGCTAAGTACAGTTGATGGCAGCAAGGA
CGAAGTATTTAGAATAGGCGAACAGTCCCGTCAACAATATGAAAGCCTAGTAGAAGAGCTCAAGCAAATCAAGCAGCAAG
TAAACGAAGTAATTGATTTTGGGGACAAGCTGGAAGTCCATACAAGACATGCTAGAAATCGCTTATCTGAGGTTAGCAGA
AACTTCAACAAATTTAGCGAAGAAGAAATCCGTGAGGCCTACGAAAAAGCACATAACTTGCAAGTGGAACTCACCATGAT
CCAGCAGCGTGAGAAGCAGCTGAGAGAAAGAAGAGACGATCTGGAAAGACGATTATTAAGCTTACAAGACGTCATTGAAC
GTTCTGAAACGCTTGTGAGTCAGATTACAGTTGTTCTCAACTATCTCAACCAGGATTTACGCCAGGTCGGCGTTTTACTT
GAAGATGCTCAGGCAAAACAAGATTTTGGTCTCAGAATTATTGAAGCCCAAGAAGAAGAACGCAAAAGAGTGTCTCGGGA
AATTCATGACGGCCCTGCTCAAATGCTGGCAAACGTGATGATGCGTTCCGAATTAATTGAACGAATTTTTAGAGACCGCG
GTACAGAAGAAGGCTTTAAAGAAATTAGAAGTCTCAGACAGAATGTGCGAAATGCACTGTACGAAGTGAGAAGAATCATT
TATGATTTAAGACCGATGGCTTTAGATGATTTGGGTCTGATTCCGACACTGAGAAAATACTTAAACACAATTGAAGAATA
TGATGGGAAAACCAAAATTACCTTCCAATGCCTAGGTGATACAGAAAGCGAAAGAATTGCTTCTCAATTTGAAGTAGCAC
TGTTTAGACTAGCCCAAGAAGCTGTCACAAATTCATTAAAGCATTCTGAAGCAGAAGAAATCTCTGTCAAAGTAGAAGTA
ACGAAAGACTTTGTGACCTTAATTATTAAAGACGATGGAAAAGGCTTTGATATGAAAGATGTGAAAACAAACAAAAACAA
ATCCTTCGGTTTACTTGGCATGAAAGAACGCGTGGACTTACTGGAAGGTAAAATGACCATAGACTCAAAAATAGGTCTAG
GGACATTCATCATGATTCGCGTGCCATTAACATTGCAAAATAAAATTGTAAAATAG

Domains

Predicted by InterproScan.

• Sensor protein DegS (DegS) (12-170)

• Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase (HATPase_c) (291-384)

• Histidine kinase (HisKA_3) (180-248)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
degS	Bacillus subtilis subsp. subtilis str. 168	85.455	98.465	0.841