Detailed information    

insolico Bioinformatically predicted

Overview

Name   dinR/lexA   Type   Regulator
Locus tag   K8Z53_RS19460 Genome accession   NZ_CP083238
Coordinates   3664735..3665358 (+) Length   207 a.a.
NCBI ID   WP_003182222.1    Uniprot ID   Q65J42
Organism   Bacillus licheniformis strain 2709     
Function   repressor of recA; repressor of dinR (predicted from homology)   
Homologous recombination

Genomic Context

Location: 3659735..3670358
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8Z53_RS19425 (K8Z53_19185) - 3659999..3660160 (+) 162 WP_202604361.1 aspartyl-phosphate phosphatase Spo0E family protein -
  K8Z53_RS19430 (K8Z53_19190) - 3660241..3660459 (-) 219 WP_003182236.1 YneF family protein -
  K8Z53_RS19435 (K8Z53_19195) sirA 3660544..3660981 (-) 438 WP_003182234.1 sporulation inhibitor of replication protein SirA -
  K8Z53_RS19440 (K8Z53_19200) recP/tkt 3661136..3663139 (-) 2004 WP_009328229.1 transketolase Machinery gene
  K8Z53_RS19445 (K8Z53_19205) - 3663306..3663539 (-) 234 WP_003182231.1 DUF896 domain-containing protein -
  K8Z53_RS19450 (K8Z53_19210) - 3663605..3664252 (-) 648 WP_003182227.1 recombinase family protein -
  K8Z53_RS19455 (K8Z53_19215) yneA 3664271..3664582 (-) 312 WP_003182225.1 cell division suppressor protein YneA -
  K8Z53_RS19460 (K8Z53_19220) dinR/lexA 3664735..3665358 (+) 624 WP_003182222.1 transcriptional repressor LexA Regulator
  K8Z53_RS19465 (K8Z53_19225) nucA/comI 3665554..3665982 (-) 429 WP_003182220.1 NucA/NucB deoxyribonuclease domain-containing protein Machinery gene
  K8Z53_RS19470 (K8Z53_19230) - 3666341..3667180 (-) 840 WP_003182218.1 thymidylate synthase -
  K8Z53_RS19475 (K8Z53_19235) - 3667240..3668001 (-) 762 WP_142782537.1 hypothetical protein -
  K8Z53_RS19480 (K8Z53_19240) - 3668092..3668925 (-) 834 WP_003182213.1 prohibitin family protein -
  K8Z53_RS19485 (K8Z53_19245) - 3668918..3669058 (-) 141 WP_003182211.1 hypothetical protein -
  K8Z53_RS19490 (K8Z53_19250) wrbA 3669379..3669990 (-) 612 WP_011198006.1 NAD(P)H:quinone oxidoreductase -

Sequence

Protein


Download         Length: 207 a.a.        Molecular weight: 23263.85 Da        Isoelectric Point: 5.3807

>NTDB_id=531247 K8Z53_RS19460 WP_003182222.1 3664735..3665358(+) (dinR/lexA) [Bacillus licheniformis strain 2709]
MTKLSKRQLDILRFIKEEVKRKGYPPSVREIGEAVGLASSSTVHGHLARLETKGLIRRDPTKPRAIEILDTEEEIHIPKN
QVVNVPVIGKVTAGTPITAVENIEEYFPLPERLAPPDEHVFMLEIMGESMIDAGILDQDYVIVKQQNTANNGDIVVAMTE
DDEATVKRFFKEETHIRLQPENPTMEPIILQNVTILGKVIGVFRTVH

Nucleotide


Download         Length: 624 bp        

>NTDB_id=531247 K8Z53_RS19460 WP_003182222.1 3664735..3665358(+) (dinR/lexA) [Bacillus licheniformis strain 2709]
ATGACGAAGCTATCAAAAAGACAACTTGATATTTTGCGTTTCATTAAAGAAGAAGTGAAGCGCAAAGGCTATCCGCCTTC
CGTCAGGGAGATCGGAGAAGCGGTCGGCCTGGCGTCAAGTTCAACGGTACACGGCCACTTGGCAAGGCTTGAAACGAAGG
GATTGATCAGAAGGGATCCGACGAAGCCGAGAGCGATCGAAATTCTCGATACAGAGGAGGAAATTCATATTCCGAAAAAC
CAGGTTGTCAATGTCCCGGTCATCGGAAAGGTGACCGCCGGTACACCGATTACCGCAGTCGAAAACATCGAGGAATACTT
TCCGCTTCCCGAACGCCTGGCGCCGCCGGATGAGCACGTCTTCATGCTGGAGATCATGGGAGAAAGCATGATCGATGCCG
GAATTCTTGATCAAGATTATGTGATTGTCAAGCAGCAGAACACCGCAAACAACGGGGATATCGTCGTTGCGATGACCGAA
GACGACGAAGCGACTGTTAAGCGGTTTTTCAAGGAGGAAACCCATATCCGCCTTCAGCCGGAAAACCCGACGATGGAGCC
GATCATCCTTCAGAATGTGACGATTCTCGGAAAAGTCATCGGCGTTTTCCGCACTGTTCATTAA

Domains

Predicted by InterProScan.

LexA DNA binding domain (LexA_DNA_bind)

(1-65)

Peptidase S24-like (Peptidase_S24)

(86-200)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure
  AlphaFold DB Q65J42

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  dinR/lexA Bacillus subtilis subsp. subtilis str. 168

91.304

100

0.913