Detailed information NTG0530472

Bioinformatically predicted

Overview

• Name: coiA
• Type: Machinery gene
• Locus tag: LLUC073_RS08820
• Genome accession: NZ_CP068698
• Coordinates: 1716871..1717854 (-)
• Length: 327 a.a.
• NCBI ID: WP_282670638.1
• Uniprot ID: -
• Organism: Lactococcus cremoris strain UC073
• Function: homologous recombination (predicted from homology) Homologous recombination

Genomic Context

Location: 1711871..1722854

Locus tag	Gene name	Coordinates (strand)	Size (bp)	Protein ID	Product	Description
LLUC073_RS08805 (LLUC073_08600)	-	1713223..1714149 (-)	927	WP_014572243.1	peptidyl-prolyl cis-trans isomerase	-
LLUC073_RS08810 (LLUC073_08605)	-	1714305..1714988 (-)	684	WP_011676723.1	O-methyltransferase	-
LLUC073_RS08815 (LLUC073_08610)	pepF	1714991..1716796 (-)	1806	WP_282670637.1	oligoendopeptidase F	Regulator
LLUC073_RS08820 (LLUC073_08615)	coiA	1716871..1717854 (-)	984	WP_282670638.1	competence protein CoiA	Machinery gene
LLUC073_RS08825 (LLUC073_08620)	-	1717929..1719023 (-)	1095	WP_318299041.1	YdcF family protein	-
LLUC073_RS08830 (LLUC073_08625)	-	1719177..1719764 (-)	588	WP_282670639.1	alpha/beta hydrolase	-
LLUC073_RS08835 (LLUC073_14050)	-	1719803..1720000 (-)	198	WP_250638141.1	alpha/beta hydrolase	-
LLUC073_RS08840 (LLUC073_08630)	-	1720215..1721636 (-)	1422	WP_011676727.1	NCS2 family permease	-
LLUC073_RS08845 (LLUC073_08635)	-	1721942..1722778 (+)	837	WP_011676728.1	Cof-type HAD-IIB family hydrolase	-

Sequence

Protein

• Length: 327 a.a.
• Molecular weight: 39038.79 Da
• Isoelectric Point: 9.7034

>NTDB_id=530472 LLUC073_RS08820 WP_282670638.1 1716871..1717854(-) (coiA) [Lactococcus cremoris strain UC073]
MLTAIDENNKIINLLELERKELTGKFYCPSCHAELLIKNGQIKVLHFAHKSLKSCNLWLENESEQHLGLKKILYQWFKRT
DKVEIERYLPELNQRPDLLVNDKIAIEIQCSHLSIKRLKERTENYKAHGFKVLWLMGKDLWLAEQVTKLQKNLVYFSENR
GFFYWELDFQRKKLRLKSLIHEDLRGRIICLQEEIPFGKGRLIAHLRLPYLAQKLVKIPTFKDPKLSSFIRQQLYYQSPK
CMKIQEKYYQKGENLLTKKFEGPYIAPLGLNLLESFTDEMTITTFTQIDQNVKLYYENFLINFQRNSLEMLYPPCFYAIM
GKQKKEK

Nucleotide

• Length: 984 bp

>NTDB_id=530472 LLUC073_RS08820 WP_282670638.1 1716871..1717854(-) (coiA) [Lactococcus cremoris strain UC073]
ATGCTGACAGCAATTGATGAAAATAATAAAATAATAAACTTACTGGAATTAGAACGCAAAGAATTGACCGGGAAATTTTA
TTGTCCTTCTTGTCATGCAGAGCTACTTATTAAAAATGGGCAGATAAAAGTTCTTCATTTTGCCCATAAATCTCTAAAGA
GCTGCAATTTATGGTTGGAAAATGAGTCAGAACAGCATTTAGGTTTGAAAAAAATATTATATCAGTGGTTTAAAAGGACT
GACAAAGTCGAAATTGAACGCTATTTGCCCGAACTTAACCAAAGACCAGATTTATTAGTAAATGACAAAATCGCTATTGA
GATACAATGCTCTCATTTATCTATTAAGCGCCTCAAAGAACGTACAGAAAATTATAAGGCGCATGGCTTTAAAGTGCTTT
GGTTGATGGGAAAGGATTTATGGCTGGCTGAACAGGTGACAAAACTTCAAAAAAATTTAGTTTATTTCTCGGAAAATAGA
GGATTCTTTTATTGGGAGTTAGATTTTCAGAGGAAAAAATTAAGATTAAAATCTCTTATTCATGAGGATTTACGCGGCAG
AATCATTTGCTTACAAGAGGAAATTCCTTTTGGAAAAGGACGACTTATTGCGCATCTACGCTTACCTTATTTGGCGCAAA
AACTGGTGAAAATTCCTACTTTTAAAGATCCTAAACTTTCTAGTTTTATTCGTCAGCAATTATACTATCAATCACCAAAA
TGTATGAAAATTCAAGAAAAATATTATCAAAAAGGAGAAAATTTACTGACGAAAAAATTTGAAGGTCCATACATTGCTCC
ACTAGGTTTAAATTTACTAGAGAGTTTTACTGACGAAATGACGATCACAACTTTTACTCAGATTGATCAAAATGTTAAGC
TTTACTATGAAAATTTTTTAATAAATTTCCAAAGAAATAGCCTTGAAATGCTCTATCCTCCCTGTTTCTATGCTATAATG
GGAAAGCAGAAAAAGGAAAAATAA

Domains

Predicted by InterproScan.

• Competence protein CoiA-like family (CoiA_nuc) (1-253)

Similar proteins

Only experimentally validated proteins are listed.

Protein	Organism	Identities (%)	Coverage (%)	Ha-value
coiA	Lactococcus lactis subsp. cremoris KW2	96.942	100	0.969
coiA	Streptococcus mitis NCTC 12261	44.136	99.083	0.437
coiA	Streptococcus pneumoniae TIGR4	42.901	99.083	0.425
coiA	Streptococcus pneumoniae Rx1	42.901	99.083	0.425
coiA	Streptococcus pneumoniae D39	42.901	99.083	0.425
coiA	Streptococcus pneumoniae R6	42.901	99.083	0.425