Detailed information    

insolico Bioinformatically predicted

Overview

Name   comEA   Type   Machinery gene
Locus tag   K8O97_RS06315 Genome accession   NZ_CP082848
Coordinates   1402475..1402792 (+) Length   105 a.a.
NCBI ID   WP_011945930.1    Uniprot ID   -
Organism   Legionella pneumophila strain FDAARGOS_1482     
Function   dsDNA binding (predicted from homology)   
DNA binding and uptake

Genomic Context

Location: 1397475..1407792
Locus tag Gene name Coordinates (strand) Size (bp) Protein ID Product Description
  K8O97_RS06295 (K8O97_06285) - 1397627..1399066 (+) 1440 WP_010946542.1 cation:proton antiporter -
  K8O97_RS06300 (K8O97_06290) nadC 1399063..1399905 (+) 843 WP_013101201.1 carboxylating nicotinate-nucleotide diphosphorylase -
  K8O97_RS06305 (K8O97_06295) - 1399902..1400993 (+) 1092 WP_013101202.1 undecaprenyldiphospho-muramoylpentapeptide beta-N-acetylglucosaminyltransferase -
  K8O97_RS06310 (K8O97_06300) - 1400968..1402383 (+) 1416 WP_010946545.1 M20 family metallopeptidase -
  K8O97_RS06315 (K8O97_06305) comEA 1402475..1402792 (+) 318 WP_011945930.1 helix-hairpin-helix domain-containing protein Machinery gene
  K8O97_RS06320 (K8O97_06310) - 1402988..1404025 (+) 1038 WP_011213320.1 rod shape-determining protein -
  K8O97_RS06325 (K8O97_06315) mreC 1404003..1404911 (+) 909 WP_010946548.1 rod shape-determining protein MreC -
  K8O97_RS06330 (K8O97_06320) mreD 1404908..1405387 (+) 480 WP_011945932.1 rod shape-determining protein MreD -
  K8O97_RS06335 (K8O97_06325) - 1405323..1405925 (-) 603 WP_013101203.1 pseudouridine synthase -
  K8O97_RS06340 (K8O97_06330) - 1406186..1406884 (+) 699 WP_011945934.1 hypothetical protein -

Sequence

Protein


Download         Length: 105 a.a.        Molecular weight: 11747.74 Da        Isoelectric Point: 10.6194

>NTDB_id=530410 K8O97_RS06315 WP_011945930.1 1402475..1402792(+) (comEA) [Legionella pneumophila strain FDAARGOS_1482]
MKARLIAILLSFIVIPFSSQAENEPQKTPAKQVLVKGKINLNTADVHSLTGSFKGIGKKRAEAIIAYRENHQGFKSLEEL
AEVKGIGQRFVDKNREKLKEIFVIN

Nucleotide


Download         Length: 318 bp        

>NTDB_id=530410 K8O97_RS06315 WP_011945930.1 1402475..1402792(+) (comEA) [Legionella pneumophila strain FDAARGOS_1482]
ATGAAAGCAAGACTCATTGCTATTTTGTTGTCATTTATTGTTATCCCTTTCTCTTCTCAAGCTGAGAACGAGCCTCAAAA
AACTCCAGCTAAACAAGTCCTTGTTAAGGGCAAGATTAATCTCAATACAGCGGATGTGCATTCTTTAACAGGCTCTTTTA
AAGGGATAGGAAAAAAACGGGCTGAAGCTATTATTGCTTATAGAGAGAATCATCAAGGCTTTAAATCTCTGGAAGAGCTT
GCGGAAGTCAAGGGTATAGGGCAGCGTTTTGTAGATAAAAATAGAGAAAAACTGAAAGAAATTTTCGTTATTAATTAA

Domains

Predicted by InterProScan.

Helix-hairpin-helix motif (HHH_3)

(37-98)


Secondary structure

Protein secondary structures were predicted by S4PRED and visualized by seqviz.



3D structure

Source ID Structure

Transmembrane helices

Transmembrane helices of protein were predicted by TMHMM 2.0 and visualized by seqviz and ECharts.


Visualization of predicted probability:


Similar proteins

Only experimentally validated proteins are listed.

Protein Organism Identities (%) Coverage (%) Ha-value
  comEA Legionella pneumophila str. Paris

99.048

100

0.99
  comEA Legionella pneumophila strain ERS1305867

99.048

100

0.99
  comE1/comEA Haemophilus influenzae Rd KW20

35.455

100

0.371
  comEA Staphylococcus aureus N315

38.384

94.286

0.362
  comEA Staphylococcus aureus MW2

38.384

94.286

0.362